RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SLC17A7Q9P2U7 560 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 RNASET2O00584 256 aaKnown RBP18.42■□□□□ 0.54
TRAF4-203ENST00000394925 AP3D1O14617 1153 aa18.42■□□□□ 0.54
TRAF4-203ENST00000394925 CPSF4O95639 269 aaKnown RBP18.42■□□□□ 0.54
TRAF4-203ENST00000394925 GUSBP08236 651 aa18.42■□□□□ 0.54
TRAF4-203ENST00000394925 HTR3AP46098 478 aa18.42■□□□□ 0.54
TRAF4-203ENST00000394925 GPAT3Q53EU6 434 aa18.42■□□□□ 0.54
TRAF4-203ENST00000394925 ANKRD46Q86W74 232 aa18.42■□□□□ 0.54
TRAF4-203ENST00000394925 CNOT9Q92600 299 aaKnown RBP18.42■□□□□ 0.54
TRAF4-203ENST00000394925 PMM1Q92871 262 aa18.42■□□□□ 0.54
TRAF4-203ENST00000394925 MKS1Q9NXB0 559 aa18.42■□□□□ 0.54
TRAF4-203ENST00000394925 OSGIN1Q9UJX0 560 aa18.42■□□□□ 0.54
TRAF4-203ENST00000394925 TLDC2A0PJX2 215 aa18.41■□□□□ 0.54
TRAF4-203ENST00000394925 ZC3H12DA2A288 527 aaKnown RBP18.41■□□□□ 0.54
TRAF4-203ENST00000394925 ZNF23P17027 643 aa18.41■□□□□ 0.54
TRAF4-203ENST00000394925 SERPINF1P36955 418 aa18.41■□□□□ 0.54
TRAF4-203ENST00000394925 POLR2HP52434 150 aaKnown RBP18.41■□□□□ 0.54
TRAF4-203ENST00000394925 EMX2Q04743 252 aa18.41■□□□□ 0.54
TRAF4-203ENST00000394925 MAD2L1Q13257 205 aaPredicted RBP18.41■□□□□ 0.54
TRAF4-203ENST00000394925 CR1LQ2VPA4 569 aa18.41■□□□□ 0.54
TRAF4-203ENST00000394925 C1QTNF12Q5T7M4 302 aa18.41■□□□□ 0.54
TRAF4-203ENST00000394925 AP1ARQ63HQ0 302 aa18.41■□□□□ 0.54
TRAF4-203ENST00000394925 AAED1Q7RTV5 226 aa18.41■□□□□ 0.54
TRAF4-203ENST00000394925 SPATA19Q7Z5L4 167 aa18.41■□□□□ 0.54
TRAF4-203ENST00000394925 KCNS3Q9BQ31 491 aa18.41■□□□□ 0.54
TRAF4-203ENST00000394925 SOX7Q9BT81 388 aa18.41■□□□□ 0.54
TRAF4-203ENST00000394925 BPESC1Q9GZL8 116 aa18.41■□□□□ 0.54
TRAF4-203ENST00000394925 NOP53Q9NZM5 478 aaKnown RBP18.41■□□□□ 0.54
TRAF4-203ENST00000394925 IGHV1-18A0A0C4DH31 117 aa18.4■□□□□ 0.54
TRAF4-203ENST00000394925 ZNF208O43345 1280 aa18.4■□□□□ 0.54
TRAF4-203ENST00000394925 PGRP06401 933 aa18.4■□□□□ 0.54
TRAF4-203ENST00000394925 UQCRC2P22695 453 aa18.4■□□□□ 0.54
TRAF4-203ENST00000394925 TACR3P29371 465 aa18.4■□□□□ 0.54
TRAF4-203ENST00000394925 HPCAP84074 193 aa18.4■□□□□ 0.54
TRAF4-203ENST00000394925 OTUD3Q5T2D3 398 aaPredicted RBP18.4■□□□□ 0.54
TRAF4-203ENST00000394925 PAQR6Q6TCH4 344 aa18.4■□□□□ 0.54
TRAF4-203ENST00000394925 POMGNT2Q8NAT1 580 aa18.4■□□□□ 0.54
TRAF4-203ENST00000394925 TMEM45BQ96B21 275 aa18.4■□□□□ 0.54
TRAF4-203ENST00000394925 AURKBQ96GD4 344 aaPredicted RBP18.4■□□□□ 0.54
TRAF4-203ENST00000394925 ZNF385AQ96PM9 386 aaKnown RBP18.4■□□□□ 0.54
TRAF4-203ENST00000394925 MYOZ1Q9NP98 299 aaPredicted RBP18.4■□□□□ 0.54
TRAF4-203ENST00000394925 CA10Q9NS85 328 aa18.4■□□□□ 0.54
TRAF4-203ENST00000394925 PRAMEF27A3QJZ7 478 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 B9A039 149 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 SPAG7O75391 227 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 SERPINB5P36952 375 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 KHKP50053 298 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 SAXO2Q658L1 398 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 VHLLQ6RSH7 139 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 TMEM99Q8N816 258 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 ZIC4Q8N9L1 334 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 ZNF540Q8NDQ6 660 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 OR9K2Q8NGE7 335 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 OR8J2Q8NGG1 315 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 PPP1R36Q96LQ0 422 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 SLC38A2Q96QD8 506 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 ASIC5Q9NY37 505 aa18.39■□□□□ 0.53
TRAF4-203ENST00000394925 LRP5LA4QPB2 252 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 SCN2BO60939 215 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 KRT33AO76009 404 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 AKR7A3O95154 331 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 CRYAAP02489 173 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 CHI3L1P36222 383 aaPredicted RBP18.38■□□□□ 0.53
TRAF4-203ENST00000394925 CEACAM7Q14002 265 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 ADIPOQQ15848 244 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 TBRG1Q3YBR2 411 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 ABHD12BQ7Z5M8 362 aaPredicted RBP18.38■□□□□ 0.53
TRAF4-203ENST00000394925 TCP10LQ8TDR4 215 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 C1orf159Q96HA4 380 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 DPY30Q9C005 99 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 OBP2BQ9NPH6 170 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 TMEM45AQ9NWC5 275 aa18.38■□□□□ 0.53
TRAF4-203ENST00000394925 MARCOQ9UEW3 520 aaPredicted RBP18.38■□□□□ 0.53
TRAF4-203ENST00000394925 PRSS51A0A1B0GVH4 220 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 TCF21O43680 179 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 LGI1O95970 557 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 C1QCP02747 245 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 OR4A8P0C604 315 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 SLC1A3P43003 542 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 LGALS3BPQ08380 585 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 OR7A5Q15622 319 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 GPAT4Q86UL3 456 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 VPS37AQ8NEZ2 397 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 OR1K1Q8NGR3 316 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 NEURL3Q96EH8 262 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 BOD1Q96IK1 185 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 KATNB1Q9BVA0 655 aa18.37■□□□□ 0.53
TRAF4-203ENST00000394925 SF3B5Q9BWJ5 86 aaKnown RBP18.37■□□□□ 0.53
TRAF4-203ENST00000394925 LIPT2A6NK58 231 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 HMGN4O00479 90 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 STAMBPO95630 424 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 GPIP06744 558 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 MAP2K6P52564 334 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 UBE2NP61088 152 aaKnown RBP18.36■□□□□ 0.53
TRAF4-203ENST00000394925 TUBA1BP68363 451 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 TUBA4AP68366 448 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 PDCD2Q16342 344 aaPredicted RBP18.36■□□□□ 0.53
TRAF4-203ENST00000394925 SYPL1Q16563 259 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 ANXA8L1Q5VT79 327 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 ANKRD16Q6P6B7 361 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms