RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 A0A096LPI6 279 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 A0A1W2PR80 420 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 TMEM229AB2RXF0 380 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 INAFM1C9JVW0 142 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 FTCDNL1E5RQL4 147 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 CLIC1O00299 241 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 DNPH1O43598 174 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 TPST1O60507 370 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 TPST2O60704 377 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 H2AFXP16104 143 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-205ENST00000394892 IL7RP16871 459 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 PTNP21246 168 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 IL32P24001 234 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 HTR2AP28223 471 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 MAGEA8P43361 318 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 CLK1P49759 484 aaKnown RBP7.79□□□□□ -1.16
ATG4A-205ENST00000394892 AQP5P55064 265 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 CSNK2A1P68400 391 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-205ENST00000394892 TXNL4AP83876 142 aaKnown RBP7.79□□□□□ -1.16
ATG4A-205ENST00000394892 HPCAP84074 193 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 SPOCK1Q08629 439 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 LRRC74AQ0VAA2 488 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF672Q499Z4 452 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-205ENST00000394892 GLIPR1L2Q4G1C9 344 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 C6orf10Q5SRN2 563 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 TSPO2Q5TGU0 170 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 RNF220Q5VTB9 566 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 FBXW9Q5XUX1 488 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 DLEU7Q6UYE1 221 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 LINGO2Q7L985 606 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 RETREG3Q86VR2 466 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 WDFY1Q8IWB7 410 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 HSD17B8Q92506 261 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 PMM1Q92871 262 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF385AQ96PM9 386 aaKnown RBP7.79□□□□□ -1.16
ATG4A-205ENST00000394892 TACO1Q9BSH4 297 aaKnown RBP7.79□□□□□ -1.16
ATG4A-205ENST00000394892 PTDSS2Q9BVG9 487 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 POTEKPQ9BYX7 375 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 AMBRA1Q9C0C7 1298 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 A4GALTQ9NPC4 353 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 TCF7L2Q9NQB0 619 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 SLC7A10Q9NS82 523 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 P2RX2Q9UBL9 471 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 SEC14L4Q9UDX3 406 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 MALT1Q9UDY8 824 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 SLC25A15Q9Y619 301 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 GMEB1Q9Y692 573 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 CSPG4Q6UVK1 2322 aa7.79□□□□□ -1.16
ATG4A-205ENST00000394892 NSD1Q96L73 2696 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-205ENST00000394892 IGKV1D-42A0A075B6H8 117 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 A0A0G2JPF8 293 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 OR5H1A6NKK0 313 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 HNRNPCL2B2RXH8 293 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 HNRNPCL3B7ZW38 293 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 CLOCKO15516 846 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 HNRNPCL1O60812 293 aaKnown RBP7.78□□□□□ -1.16
ATG4A-205ENST00000394892 FZD7O75084 574 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 RAD51DO75771 328 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 AKR7A3O95154 331 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 TGDSO95455 350 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 CNOT4O95628 575 aaKnown RBP7.78□□□□□ -1.16
ATG4A-205ENST00000394892 IFNA2P01563 188 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 HNRNPCL4P0DMR1 293 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 ARAFP10398 606 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 HTR3AP46098 478 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 NR1H2P55055 460 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 CEACAM7Q14002 265 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 SELPLGQ14242 412 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 PPA1Q15181 289 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 STK11Q15831 433 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 GABRA6Q16445 453 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 LIN52Q52LA3 116 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 C9orf135Q5VTT2 229 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 PAQR6Q6TCH4 344 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 NHLRC1Q6VVB1 395 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 B3GLCTQ6Y288 498 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 PEX5LQ8IYB4 626 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF100Q8IYN0 542 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 OR9K2Q8NGE7 335 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 PIGXQ8TBF5 258 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 CKAP2Q8WWK9 683 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 NANOS1Q8WY41 292 aaKnown RBP7.78□□□□□ -1.16
ATG4A-205ENST00000394892 THOC1Q96FV9 657 aaKnown RBP7.78□□□□□ -1.16
ATG4A-205ENST00000394892 MUS81Q96NY9 551 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 CCDC28BQ9BUN5 200 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 SPATA9Q9BWV2 254 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 LAMP3Q9UQV4 416 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 NOSIPQ9Y314 301 aaKnown RBP7.78□□□□□ -1.16
ATG4A-205ENST00000394892 RNF115Q9Y4L5 304 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 MAGED1Q9Y5V3 778 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-205ENST00000394892 CADP27708 2225 aa7.78□□□□□ -1.16
ATG4A-205ENST00000394892 UQCRHLA0A096LP55 91 aa7.77□□□□□ -1.17
ATG4A-205ENST00000394892 AQP7P3A6NL99 342 aa7.77□□□□□ -1.17
ATG4A-205ENST00000394892 E7EQL1 145 aa7.77□□□□□ -1.17
ATG4A-205ENST00000394892 NR5A2O00482 541 aa7.77□□□□□ -1.17
ATG4A-205ENST00000394892 TMCC2O75069 709 aa7.77□□□□□ -1.17
ATG4A-205ENST00000394892 TP53P04637 393 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-205ENST00000394892 GGT1P19440 569 aa7.77□□□□□ -1.17
ATG4A-205ENST00000394892 CDKN1AP38936 164 aa7.77□□□□□ -1.17
ATG4A-205ENST00000394892 CRISP3P54108 245 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms