RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 USP53Q70EK8 1073 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 PRSS45Q7RTY3 260 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 GPR148Q8TDV2 347 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 PDCD1LG2Q9BQ51 273 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 C20orf85Q9H1P6 137 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 ATG5Q9H1Y0 275 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 IL21RQ9HBE5 538 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 IFT46Q9NQC8 304 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 STARD5Q9NSY2 213 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 SCML1Q9UN30 329 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 FNDC1Q4ZHG4 1894 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 HCRTR2O43614 444 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 PDGFAP04085 211 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 PNMTP11086 282 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 GP1BBP13224 206 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 VEGFCP49767 419 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 DLX5P56178 289 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 ZNF761Q86XN6 746 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 METTL27Q8N6F8 245 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 OR13C5Q8NGS8 318 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 ZFPM2Q8WW38 1151 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 PMM1Q92871 262 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 KLHL15Q96M94 604 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 NMNAT3Q96T66 252 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 LYRM4Q9HD34 91 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 TBC1D29Q9UFV1 150 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 TRAV18A0A075B6X5 111 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 METTL21EPA6NDL7 271 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 PHYHO14832 338 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 LALBAP00709 142 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 MAKP20794 623 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 GPLD1P80108 840 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 AGBL4Q5VU57 503 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 C1orf53Q5VUE5 145 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 OVCH1Q7RTY7 1134 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 PEG10Q86TG7 708 aaKnown RBP10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 RASGRP3Q8IV61 690 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 CCDC120Q96HB5 630 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 WFDC6Q9BQY6 131 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 RNF32Q9H0A6 362 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 B3GAT2Q9NPZ5 323 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 MBD2Q9UBB5 411 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 MSRAQ9UJ68 235 aa10.77□□□□□ -0.68
UBE2D3-209ENST00000394804 TMEM229AB2RXF0 380 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 KHNYNO15037 678 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 AHSA1O95433 338 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 CYB5AP00167 134 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 IGHA1P01876 353 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 RAF1P04049 648 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 CEACAM5P06731 702 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 OR8G3PP0DMU2 310 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 RBM34P42696 430 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 P2RX3P56373 397 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 KCTD20Q7Z5Y7 419 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 SYT9Q86SS6 491 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 OR5J2Q8NH18 312 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 ADAMTS18Q8TE60 1221 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 S100A13Q99584 98 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 PPP1R3EQ9H7J1 279 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 NCDNQ9UBB6 729 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 CA5BQ9Y2D0 317 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 A0A0A6YYC8 382 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 TEX51A0A1B0GUA7 166 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 A0A1W2PPV9 198 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 I3L1I5 382 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 PRSS3P35030 304 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 IGFALSP35858 605 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 ACTBP60709 375 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 ACTG1P63261 375 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 ACSM1Q08AH1 577 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 C1orf61Q13536 156 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 RAB11BQ15907 218 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 ZIC1Q15915 447 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 SLC25A35Q3KQZ1 300 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 ZNF542PQ5EBM4 170 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 DNM1P34Q6PK57 102 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 KIAA0907Q7Z7F0 614 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 SYS1Q8N2H4 156 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 ZDHHC1Q8WTX9 485 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 PCNPQ8WW12 178 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 SMIM19Q96E16 107 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 GIMAP5Q96F15 307 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 ALG12Q9BV10 488 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 CENPMQ9NSP4 180 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 NUP50Q9UKX7 468 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 DHDHQ9UQ10 334 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 CNTRLQ7Z7A1 2325 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 CDC42EP2O14613 210 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 CCKBRP32239 447 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 RAB38P57729 211 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 GALK2Q01415 458 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 OPCMLQ14982 345 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 CDK5R1Q15078 307 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 MLF2Q15773 248 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 TCTE1Q5JU00 501 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 EOGTQ5NDL2 527 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 ESPNLQ6ZVH7 1005 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 ZNF680Q8NEM1 530 aa10.77□□□□□ -0.69
UBE2D3-209ENST00000394804 OR9A4Q8NGU2 314 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms