RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 DYRK1AQ13627 763 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 PRICKLE4Q2TBC4 344 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 SLC22A10Q63ZE4 541 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 FCRL6Q6DN72 434 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 BAIAP2L2Q6UXY1 529 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 FGD2Q7Z6J4 655 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 PIAS4Q8N2W9 510 aaPredicted RBP16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 OR56B4Q8NH76 319 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 RPLP0P6Q8NHW5 317 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 HLA-CQ95604 372 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 ZNF426Q9BUY5 554 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 DPCDQ9BVM2 203 aaPredicted RBP16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 SERTAD3Q9UJW9 196 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 ICAM5Q9UMF0 924 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 MPC2O95563 127 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 KLF8O95600 359 aaPredicted RBP16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 DNASE1P24855 282 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 SSTR2P30874 369 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 NAA10P41227 235 aaPredicted RBP16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 MGAT2Q10469 447 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 FGFBP1Q14512 234 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 POU4F3Q15319 338 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 OVCH1Q7RTY7 1134 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 CMTM4Q8IZR5 234 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 SYS1Q8N2H4 156 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 OR4K13Q8NH42 304 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 GABRG3Q99928 467 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 MFRPQ9BY79 579 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 C20orf85Q9H1P6 137 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 NARFLQ9H6Q4 476 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 CHRNA9Q9UGM1 479 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 EML5Q05BV3 1969 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 TP53BP1Q12888 1972 aaPredicted RBP16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 G3V3Q6 166 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 SLC31A1O15431 190 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 SSNA1O43805 119 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 OR2T7P0C7T2 308 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 HIST1H1CP16403 213 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 EMDP50402 254 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 SIRPAP78324 504 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 CDONQ4KMG0 1287 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 UBE2NLQ5JXB2 153 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 ZCCHC12Q6PEW1 402 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 FANCMQ8IYD8 2048 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 SLC38A6Q8IZM9 456 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 ZNF614Q8N883 585 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 OR2T27Q8NH04 317 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 ZNF671Q8TAW3 534 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 DERL3Q96Q80 235 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 PDCD1LG2Q9BQ51 273 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 CD93Q9NPY3 652 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 NRIP3Q9NQ35 241 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 PRDM9Q9NQV7 894 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 MRPL15Q9P015 296 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 FBXL21Q9UKT6 434 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 LOC105371267A0A1B0GV96 52 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 RPS10-NUDT3A0A1W2PQS6 291 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 GMDSO60547 372 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 AK1P00568 194 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 HOXB2P14652 356 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 ZNF81P51508 661 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 ACTA2P62736 377 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 ACTG2P63267 376 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 HSF2Q03933 536 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 GPR139Q6DWJ6 353 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 SLC35F2Q8IXU6 374 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 FAM98AQ8NCA5 519 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 OR5T3Q8NGG3 340 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 CCL4L1Q8NHW4 92 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 ZNRF4Q8WWF5 429 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 NXPE2Q96DL1 559 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 CNN2Q99439 309 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 LYRM4Q9HD34 91 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 ANKRD10Q9NXR5 420 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 NKIRAS2Q9NYR9 191 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 SCP2D1Q9UJQ7 156 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 PILRAQ9UKJ1 303 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 NPTNQ9Y639 398 aa16.85■□□□□ 0.29
PCDHA1-202ENST00000394633 TRBV2A0A0J9YWF9 115 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 URADA6NGE7 173 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 TNFSF14O43557 240 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 PLRG1O43660 514 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 GATBO75879 557 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 PDGFAP04085 211 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 EDNRAP25101 427 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 ACAA2P42765 397 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 SELENOPP49908 381 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 VSX2P58304 361 aaPredicted RBP16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 CRYZQ08257 329 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 EXOSC2Q13868 293 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 GGTLC2Q14390 218 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 PRRT3Q5FWE3 981 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 TMEM255AQ5JRV8 349 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 ZNF776Q68DI1 518 aaPredicted RBP16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 ZC3H14Q6PJT7 736 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 FIGLAQ6QHK4 219 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 UNQ9370/PRO34162Q6UXP9 181 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 ABHD13Q7L211 337 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 SLITRK4Q8IW52 837 aa16.84■□□□□ 0.29
PCDHA1-202ENST00000394633 OR1E3Q8WZA6 343 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms