RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 KLF10Q13118 480 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 CEACAM7Q14002 265 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 ELOA3BQ3SY89 546 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 BEX5Q5H9J7 111 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 C1orf140Q5VVS0 124 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 C5orf46Q6UWT4 87 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 PAMR1Q6UXH9 720 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 PATL1Q86TB9 770 aaKnown RBP16.68■□□□□ 0.26
TRPT1-202ENST00000394546 RANBP3LQ86VV4 465 aaPredicted RBP16.68■□□□□ 0.26
TRPT1-202ENST00000394546 UBE2J2Q8N2K1 259 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 C10orf111Q8N326 155 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 LSMEM1Q8N8F7 131 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 ELOA3Q8NG57 546 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 OR52E4Q8NGH9 312 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 C3orf49Q96BT1 292 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 DNAJA3Q96EY1 480 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 SF3B5Q9BWJ5 86 aaKnown RBP16.68■□□□□ 0.26
TRPT1-202ENST00000394546 PIF1Q9H611 641 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 PLEKHF2Q9H8W4 249 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 TMEM27Q9HBJ8 222 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 GID8Q9NWU2 228 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 TESQ9UGI8 421 aaKnown RBP16.68■□□□□ 0.26
TRPT1-202ENST00000394546 SLC9A8Q9Y2E8 581 aa16.68■□□□□ 0.26
TRPT1-202ENST00000394546 CSMD2Q7Z408 3487 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 ZC3H12DA2A288 527 aaKnown RBP16.67■□□□□ 0.26
TRPT1-202ENST00000394546 LIPT2A6NK58 231 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 ZNF716A6NP11 495 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 DEFB108AA8MXU0 73 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 ZNF814B7Z6K7 855 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 FRS3O43559 492 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 VAMP5O95183 116 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 AHSA1O95433 338 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 KLK2P20151 261 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 IST1P53990 364 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 HOXC5Q00444 222 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 OR7A5Q15622 319 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 OTUD3Q5T2D3 398 aaPredicted RBP16.67■□□□□ 0.26
TRPT1-202ENST00000394546 FAM91A1Q658Y4 838 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 CGB2Q6NT52 195 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 BHLHA15Q7RTS1 189 aaPredicted RBP16.67■□□□□ 0.26
TRPT1-202ENST00000394546 NET1Q7Z628 596 aaPredicted RBP16.67■□□□□ 0.26
TRPT1-202ENST00000394546 ATG4DQ86TL0 474 aaPredicted RBP16.67■□□□□ 0.26
TRPT1-202ENST00000394546 CCDC103Q8IW40 242 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 S100PBPQ96BU1 408 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 LRRC58Q96CX6 371 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 FOXC2Q99958 501 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 ECSITQ9BQ95 431 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 CCM2LQ9NUG4 571 aaPredicted RBP16.67■□□□□ 0.26
TRPT1-202ENST00000394546 PLEKHA6Q9Y2H5 1048 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 CAPN7Q9Y6W3 813 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 OTOGQ6ZRI0 2925 aa16.67■□□□□ 0.26
TRPT1-202ENST00000394546 FBP2O00757 339 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 MRASO14807 208 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 OR2T1O43869 369 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 CCDC22O60826 627 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 C8BP07358 591 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 GTF2E2P29084 291 aaKnown RBP16.66■□□□□ 0.26
TRPT1-202ENST00000394546 RGS8P57771 180 aaPredicted RBP16.66■□□□□ 0.26
TRPT1-202ENST00000394546 SF3A3Q12874 501 aaKnown RBP eCLIP16.66■□□□□ 0.261e-6■■□□□ 12.7
TRPT1-202ENST00000394546 BNIP2Q12982 314 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 CAPRIN1Q14444 709 aaKnown RBP16.66■□□□□ 0.26
TRPT1-202ENST00000394546 FBXW9Q5XUX1 488 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 TMEM225Q6GV28 225 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 ULK3Q6PHR2 472 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 C6orf89Q6UWU4 347 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 SPNS3Q6ZMD2 512 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 PTOV1Q86YD1 416 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 WFDC8Q8IUA0 241 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 OR8J3Q8NGG0 315 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 OR10A6Q8NH74 314 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 SLC26A7Q8TE54 656 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 RASSF5Q8WWW0 418 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 MBD6Q96DN6 1003 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 SLC47A1Q96FL8 570 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 LIME1Q9H400 295 aa16.66■□□□□ 0.26
TRPT1-202ENST00000394546 AQP7P3A6NL99 342 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 TMEM229AB2RXF0 380 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 M0QX08 132 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 MFN2O95140 757 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 THBDP07204 575 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 PCGF2P35227 344 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 PCBP3P57721 371 aaKnown RBP16.65■□□□□ 0.26
TRPT1-202ENST00000394546 SELPLGQ14242 412 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 SLC17A1Q14916 467 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 TESK1Q15569 626 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 ALG10BQ5I7T1 473 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 REP15Q6BDI9 236 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 NANOGP8Q6NSW7 305 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 P2RY8Q86VZ1 359 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 SNX32Q86XE0 403 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 MFSD8Q8NHS3 518 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 MUCL1Q96DR8 90 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 ZNF317Q96PQ6 595 aaPredicted RBP16.65■□□□□ 0.26
TRPT1-202ENST00000394546 NANOGQ9H9S0 305 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 ASB6Q9NWX5 421 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 ADPRHL2Q9NX46 363 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 PRSS50Q9UI38 385 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 RASD1Q9Y272 281 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 AP3M1Q9Y2T2 418 aa16.65■□□□□ 0.26
TRPT1-202ENST00000394546 ABCA4P78363 2273 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms