RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 CXCR1P25024 350 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 ITGB8P26012 769 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 ARFIP1P53367 373 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 CD300LDQ6UXZ3 194 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 ZNF248Q8NDW4 579 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 ATG5Q9H1Y0 275 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 PRDM9Q9NQV7 894 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 ABRACLQ9P1F3 81 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 EIF1AYO14602 144 aaKnown RBP14.91□□□□□ -0.02
PCDH1-203ENST00000394536 HCRTR2O43614 444 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 DOK2O60496 412 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 MOSPD3O75425 235 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 SPARCP09486 303 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 VAMP1P23763 118 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 BTG1P62324 171 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 BTN1A1Q13410 526 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 RUNX2Q13950 521 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 C7orf61Q8IZ16 206 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 DEFB119Q8N690 84 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 GALNT6Q8NCL4 622 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 OR5AK2Q8NH90 309 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 SENP5Q96HI0 755 aaPredicted RBP14.91□□□□□ -0.02
PCDH1-203ENST00000394536 ANKRD19PQ9H560 264 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 CD93Q9NPY3 652 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 KLK11Q9UBX7 282 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 DAPP1Q9UN19 280 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 PLEKHA6Q9Y2H5 1048 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 RP1P56715 2156 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 SCDO00767 359 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 ECDO95905 644 aaPredicted RBP14.9□□□□□ -0.02
PCDH1-203ENST00000394536 TFPIP10646 304 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 ATF1P18846 271 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 UBE2MP61081 183 aaKnown RBP14.9□□□□□ -0.02
PCDH1-203ENST00000394536 TIGD3Q6B0B8 471 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 ZNF227Q86WZ6 799 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 PRR22Q8IZ63 422 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 RNF113BQ8IZP6 322 aaKnown RBP14.9□□□□□ -0.02
PCDH1-203ENST00000394536 CASTOR1Q8WTX7 329 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 METTL21AQ8WXB1 218 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 AHCYL2Q96HN2 611 aaKnown RBP14.9□□□□□ -0.02
PCDH1-203ENST00000394536 SEMA4CQ9C0C4 833 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 CCDC86Q9H6F5 360 aaKnown RBP14.9□□□□□ -0.02
PCDH1-203ENST00000394536 PRTFDC1Q9NRG1 225 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 A0A0B4J293 547 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 A0A1W2PPV9 198 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 C2orf74A8MZ97 194 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 CA3P07451 260 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 ANXA7P20073 488 aaKnown RBP14.9□□□□□ -0.02
PCDH1-203ENST00000394536 AQP2P41181 271 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 KIAA1024LP59773 190 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 MAT1AQ00266 395 aaKnown RBP14.9□□□□□ -0.02
PCDH1-203ENST00000394536 TAF13Q15543 124 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 YOD1Q5VVQ6 348 aaPredicted RBP14.9□□□□□ -0.02
PCDH1-203ENST00000394536 METTL11BQ5VVY1 283 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 FAAH2Q6GMR7 532 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 DUSP18Q8NEJ0 188 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 RSPRY1Q96DX4 576 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 MED30Q96HR3 178 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 HDAC8Q9BY41 377 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 LIN7BQ9HAP6 207 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 NOP16Q9Y3C1 178 aaKnown RBP14.9□□□□□ -0.02
PCDH1-203ENST00000394536 CASP8AP2Q9UKL3 1982 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 GPR143P51810 404 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 C19orf48Q6RUI8 117 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 PRSS41Q7RTY9 318 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 KRT77Q7Z794 578 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 BRIX1Q8TDN6 353 aaKnown RBP14.9□□□□□ -0.02
PCDH1-203ENST00000394536 TRIM43Q96BQ3 446 aaPredicted RBP14.9□□□□□ -0.02
PCDH1-203ENST00000394536 Q96M85 177 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 ULBP3Q9BZM4 244 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 POT1Q9NUX5 634 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 SCP2D1Q9UJQ7 156 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 ERVK-19Q9WJR5 959 aa14.9□□□□□ -0.02
PCDH1-203ENST00000394536 RP2O75695 350 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 IFNA6P05013 189 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 CEACAM5P06731 702 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 MAOBP27338 520 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 OLFML2AQ68BL7 652 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 FAM198BQ6UWH4 519 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 C3P1Q6ZMU1 363 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 OR1E3Q8WZA6 343 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 C5orf34Q96MH7 638 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 ACAD8Q9UKU7 415 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 NPFFR2Q9Y5X5 522 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 UGT2B7P16662 529 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 AKT2P31751 481 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 FUT5Q11128 374 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 GFOD2Q3B7J2 385 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 ARHGDIGQ99819 225 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 SLX1AQ9BQ83 275 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 C20orf85Q9H1P6 137 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 IDSB3KWA1 339 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 RAF1P04049 648 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 SRMP19623 302 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 TBXA2RP21731 343 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 NUP62P37198 522 aaPredicted RBP14.89□□□□□ -0.03
PCDH1-203ENST00000394536 OPCMLQ14982 345 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 TOR2AQ5JU69 321 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 GARNL3Q5VVW2 1013 aa14.89□□□□□ -0.03
PCDH1-203ENST00000394536 ULK3Q6PHR2 472 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms