RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 H3F3AP84243 136 aa27.23■■□□□ 1.95
CMTM4-202ENST00000394106 P2RY6Q15077 328 aa27.23■■□□□ 1.95
CMTM4-202ENST00000394106 GLIPR1L2Q4G1C9 344 aa27.23■■□□□ 1.95
CMTM4-202ENST00000394106 ARMC8Q8IUR7 673 aa27.23■■□□□ 1.95
CMTM4-202ENST00000394106 HS3ST6Q96QI5 342 aa27.23■■□□□ 1.95
CMTM4-202ENST00000394106 SAR1AQ9NR31 198 aa27.23■■□□□ 1.95
CMTM4-202ENST00000394106 PRORSD1PA6NEY8 169 aa27.22■■□□□ 1.95
CMTM4-202ENST00000394106 LIPT2A6NK58 231 aa27.22■■□□□ 1.95
CMTM4-202ENST00000394106 SERPINB7O75635 380 aa27.22■■□□□ 1.95
CMTM4-202ENST00000394106 ATE1O95260 518 aa27.22■■□□□ 1.95
CMTM4-202ENST00000394106 MDH1P40925 334 aaKnown RBP27.22■■□□□ 1.95
CMTM4-202ENST00000394106 SLC16A1P53985 500 aa27.22■■□□□ 1.95
CMTM4-202ENST00000394106 KLF10Q13118 480 aa27.22■■□□□ 1.95
CMTM4-202ENST00000394106 ITGADQ13349 1161 aa27.22■■□□□ 1.95
CMTM4-202ENST00000394106 OTUD3Q5T2D3 398 aaPredicted RBP27.22■■□□□ 1.95
CMTM4-202ENST00000394106 ATG4DQ86TL0 474 aaPredicted RBP27.22■■□□□ 1.95
CMTM4-202ENST00000394106 UBE2J2Q8N2K1 259 aa27.22■■□□□ 1.95
CMTM4-202ENST00000394106 APH1AQ96BI3 265 aa27.22■■□□□ 1.95
CMTM4-202ENST00000394106 TAPBPLQ9BX59 468 aa27.22■■□□□ 1.95
CMTM4-202ENST00000394106 MRGBPQ9NV56 204 aa27.22■■□□□ 1.95
CMTM4-202ENST00000394106 SLC13A4Q9UKG4 626 aa27.22■■□□□ 1.95
CMTM4-202ENST00000394106 LYZL6O75951 148 aa27.21■■□□□ 1.95
CMTM4-202ENST00000394106 AKR7A3O95154 331 aa27.21■■□□□ 1.95
CMTM4-202ENST00000394106 IGHV3-9P01782 118 aa27.21■■□□□ 1.95
CMTM4-202ENST00000394106 ADSLP30566 484 aaPredicted RBP27.21■■□□□ 1.95
CMTM4-202ENST00000394106 RBBP4Q09028 425 aa27.21■■□□□ 1.95
CMTM4-202ENST00000394106 TRMT5Q32P41 509 aaKnown RBP27.21■■□□□ 1.95
CMTM4-202ENST00000394106 MMEL1Q495T6 779 aa27.21■■□□□ 1.95
CMTM4-202ENST00000394106 C1orf140Q5VVS0 124 aa27.21■■□□□ 1.95
CMTM4-202ENST00000394106 PAQR6Q6TCH4 344 aa27.21■■□□□ 1.95
CMTM4-202ENST00000394106 BHLHA15Q7RTS1 189 aaPredicted RBP27.21■■□□□ 1.95
CMTM4-202ENST00000394106 FOXC2Q99958 501 aa27.21■■□□□ 1.95
CMTM4-202ENST00000394106 ADPRHL2Q9NX46 363 aa27.21■■□□□ 1.95
CMTM4-202ENST00000394106 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP27.2■■□□□ 1.94
CMTM4-202ENST00000394106 ELOA3DA6NLF2 546 aaPredicted RBP27.2■■□□□ 1.94
CMTM4-202ENST00000394106 TMEM229AB2RXF0 380 aa27.2■■□□□ 1.94
CMTM4-202ENST00000394106 KLF4O43474 513 aa27.2■■□□□ 1.94
CMTM4-202ENST00000394106 MRPL33O75394 65 aaKnown RBP27.2■■□□□ 1.94
CMTM4-202ENST00000394106 ELOA3BQ3SY89 546 aa27.2■■□□□ 1.94
CMTM4-202ENST00000394106 BEX5Q5H9J7 111 aa27.2■■□□□ 1.94
CMTM4-202ENST00000394106 TMEM99Q8N816 258 aa27.2■■□□□ 1.94
CMTM4-202ENST00000394106 ELOA3Q8NG57 546 aa27.2■■□□□ 1.94
CMTM4-202ENST00000394106 OR52E4Q8NGH9 312 aa27.2■■□□□ 1.94
CMTM4-202ENST00000394106 PRR14Q9BWN1 585 aa27.2■■□□□ 1.94
CMTM4-202ENST00000394106 KAT8Q9H7Z6 458 aaKnown RBP27.2■■□□□ 1.94
CMTM4-202ENST00000394106 UBTD1Q9HAC8 227 aa27.2■■□□□ 1.94
CMTM4-202ENST00000394106 KLHL14Q9P2G3 628 aa27.2■■□□□ 1.94
CMTM4-202ENST00000394106 HTR2AP28223 471 aa27.19■■□□□ 1.94
CMTM4-202ENST00000394106 LOXP28300 417 aaPredicted RBP27.19■■□□□ 1.94
CMTM4-202ENST00000394106 NTF4P34130 210 aa27.19■■□□□ 1.94
CMTM4-202ENST00000394106 RGS8P57771 180 aaPredicted RBP27.19■■□□□ 1.94
CMTM4-202ENST00000394106 NCALDP61601 193 aa27.19■■□□□ 1.94
CMTM4-202ENST00000394106 DMTNQ08495 405 aa27.19■■□□□ 1.94
CMTM4-202ENST00000394106 CYLC2Q14093 348 aaPredicted RBP27.19■■□□□ 1.94
CMTM4-202ENST00000394106 SPNS3Q6ZMD2 512 aa27.19■■□□□ 1.94
CMTM4-202ENST00000394106 SMYD1Q8NB12 490 aa27.19■■□□□ 1.94
CMTM4-202ENST00000394106 BHLHE22Q8NFJ8 381 aaPredicted RBP27.19■■□□□ 1.94
CMTM4-202ENST00000394106 OR10A6Q8NH74 314 aa27.19■■□□□ 1.94
CMTM4-202ENST00000394106 PIF1Q9H611 641 aa27.19■■□□□ 1.94
CMTM4-202ENST00000394106 MFN2O95140 757 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 AHSA1O95433 338 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 IGHV1-2P23083 117 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 PCBP3P57721 371 aaKnown RBP27.18■■□□□ 1.94
CMTM4-202ENST00000394106 SLC17A1Q14916 467 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 MAPRE2Q15555 327 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 FBXW9Q5XUX1 488 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 REP15Q6BDI9 236 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 CASP12Q6UXS9 341 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 NET1Q7Z628 596 aaPredicted RBP27.18■■□□□ 1.94
CMTM4-202ENST00000394106 SNX32Q86XE0 403 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 STK35Q8TDR2 534 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 PLPPR2Q96GM1 343 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 TRIM2Q9C040 744 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 SLC9A8Q9Y2E8 581 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 FLVCR1Q9Y5Y0 555 aa27.18■■□□□ 1.94
CMTM4-202ENST00000394106 A0A1B0GWA3 101 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 MRASO14807 208 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 ATP8B1O43520 1251 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 CNOT4O95628 575 aaKnown RBP27.17■■□□□ 1.94
CMTM4-202ENST00000394106 OPN1SWP03999 348 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 TAB1Q15750 504 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 STK11Q15831 433 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 NANOGP8Q6NSW7 305 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 GPAT4Q86UL3 456 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 LSMEM1Q8N8F7 131 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 RNF217Q8TC41 542 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 HSD17B8Q92506 261 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 SLC25A36Q96CQ1 311 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 MBD6Q96DN6 1003 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 NANOGQ9H9S0 305 aa27.17■■□□□ 1.94
CMTM4-202ENST00000394106 TESQ9UGI8 421 aaKnown RBP27.17■■□□□ 1.94
CMTM4-202ENST00000394106 LOC100653049A0A140TA62 436 aa27.16■■□□□ 1.94
CMTM4-202ENST00000394106 AQP7P3A6NL99 342 aa27.16■■□□□ 1.94
CMTM4-202ENST00000394106 BBIP1A8MTZ0 92 aa27.16■■□□□ 1.94
CMTM4-202ENST00000394106 M0QX08 132 aa27.16■■□□□ 1.94
CMTM4-202ENST00000394106 NPIPB7O75200 414 aa27.16■■□□□ 1.94
CMTM4-202ENST00000394106 KRT34O76011 436 aa27.16■■□□□ 1.94
CMTM4-202ENST00000394106 RPS5P46782 204 aaKnown RBP27.16■■□□□ 1.94
CMTM4-202ENST00000394106 RABL3Q5HYI8 236 aa27.16■■□□□ 1.94
CMTM4-202ENST00000394106 ALG10BQ5I7T1 473 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms