RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 GLRX2Q9NS18 164 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 ADPRHL2Q9NX46 363 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 CMTM6Q9NX76 183 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 KLHL9Q9P2J3 617 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 SEC14L4Q9UDX3 406 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC13A4Q9UKG4 626 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 HDGFL3Q9Y3E1 203 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 TESMINQ9Y4I5 508 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 OTOGQ6ZRI0 2925 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 VPS13CQ709C8 3753 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 IGKV1D-42A0A075B6H8 117 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 A0A1W2PPR1 153 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 GMNCA6NCL1 334 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 PRORSD1PA6NEY8 169 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 LIPT2A6NK58 231 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 ELOA3DA6NLF2 546 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 CPSF4LA6NMK7 179 aaKnown RBP6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 A8MVM7 634 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 C16orf97H3BN30 126 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 NME4O00746 187 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 DYNC1I1O14576 645 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZNF208O43345 1280 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 SNX3O60493 162 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 CCDC22O60826 627 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 SHOX2O60902 331 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 SERPINB7O75635 380 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 ADAP00813 363 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 THBDP07204 575 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 EPXP11678 715 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 RPS5P46782 204 aaKnown RBP6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 NUDT2P50583 147 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 NCALDP61601 193 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC35A1P78382 337 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 NOTCH2Q04721 2471 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 EGR4Q05215 589 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 RBBP4Q09028 425 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 FOXD4Q12950 439 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 OR1Q1Q15612 314 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 ELOA3BQ3SY89 546 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 LRRC23Q53EV4 343 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 ALG10BQ5I7T1 473 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 OTUD3Q5T2D3 398 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 C1orf140Q5VVS0 124 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 FBXW10Q5XX13 1052 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 CPLX4Q7Z7G2 160 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 GPAT4Q86UL3 456 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 CDH24Q86UP0 819 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 CDC20BQ86Y33 519 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 GABRG1Q8N1C3 465 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC43A2Q8N370 569 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 KDM8Q8N371 416 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 PCYOX1LQ8NBM8 494 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 ELOA3Q8NG57 546 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 OR8J3Q8NGG0 315 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 OR6T1Q8NGN1 323 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 RP9Q8TA86 221 aaKnown RBP6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC25A36Q96CQ1 311 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZHX1-C8orf76Q96EF9 292 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZNF583Q96ND8 569 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 ECSITQ9BQ95 431 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 MED18Q9BUE0 208 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 PTDSS2Q9BVG9 487 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 POLDIP3Q9BY77 421 aaKnown RBP6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 ACTR6Q9GZN1 396 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 NSRP1Q9H0G5 558 aaKnown RBP6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 MYLK2Q9H1R3 596 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 RASSF1Q9NS23 344 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 GID8Q9NWU2 228 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 ELOVL5Q9NYP7 299 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 RPS6KB2Q9UBS0 482 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 ITGB1BP2Q9UKP3 347 aa6.8□□□□□ -1.32
HMGB3P1-201ENST00000393368 HEATR5AQ86XA9 2040 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 POLQO75417 2590 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 MED12LQ86YW9 2145 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 IGKV3D-15A0A087WSY6 115 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 A0A0B4J2E0 115 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 A0A1B0GX12 115 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZNF724A8MTY0 619 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 DEFB108AA8MXU0 73 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 FAM220BPB1ANY3 271 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 FTCDNL1E5RQL4 147 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 LRRN3E7EW58 273 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC22A2O15244 555 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 NPIPB7O75200 414 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 LYZL6O75951 148 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 LGI1O95970 557 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 HRGP04196 525 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 THY1P04216 161 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 GPIP06744 558 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 PEX19P40855 299 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 OR1E2P47887 323 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 OR3A2P47893 321 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 CLK1P49759 484 aaKnown RBP6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 P2RY4P51582 365 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC7A2P52569 658 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 CDH12P55289 794 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 FOXG1P55316 489 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 H3F3AP84243 136 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 LIPEQ05469 1076 aa6.79□□□□□ -1.32
HMGB3P1-201ENST00000393368 LGALS3BPQ08380 585 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms