RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 SLC2A5P22732 501 aa9.75□□□□□ -0.85
PDGFD-202ENST00000393158 CHN2P52757 468 aa9.75□□□□□ -0.85
PDGFD-202ENST00000393158 AIMP2Q13155 320 aaKnown RBP9.75□□□□□ -0.85
PDGFD-202ENST00000393158 RNFT1Q5M7Z0 435 aa9.75□□□□□ -0.85
PDGFD-202ENST00000393158 HLA-DQA1Q5Y7H0 255 aa9.75□□□□□ -0.85
PDGFD-202ENST00000393158 JMJD6Q6NYC1 403 aaPredicted RBP9.75□□□□□ -0.85
PDGFD-202ENST00000393158 ZNF440Q8IYI8 595 aa9.75□□□□□ -0.85
PDGFD-202ENST00000393158 SNIP1Q8TAD8 396 aaKnown RBP9.75□□□□□ -0.85
PDGFD-202ENST00000393158 SLC22A8Q8TCC7 542 aa9.75□□□□□ -0.85
PDGFD-202ENST00000393158 ZPLD1Q8TCW7 415 aa9.75□□□□□ -0.85
PDGFD-202ENST00000393158 GPX7Q96SL4 187 aaPredicted RBP9.75□□□□□ -0.85
PDGFD-202ENST00000393158 RIBC2Q9H4K1 309 aa9.75□□□□□ -0.85
PDGFD-202ENST00000393158 KLHL28Q9NXS3 571 aa9.75□□□□□ -0.85
PDGFD-202ENST00000393158 FAM32AQ9Y421 112 aaKnown RBP9.75□□□□□ -0.85
PDGFD-202ENST00000393158 G3V3Y1 287 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 KPNA4O00629 521 aaPredicted RBP9.74□□□□□ -0.85
PDGFD-202ENST00000393158 SURF4O15260 269 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 ICAM2P13598 275 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 GIPRP48546 466 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 MED21Q13503 144 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 PSD4Q8NDX1 1056 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 FDCSPQ8NFU4 85 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 SUN5Q8TC36 379 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 DNAJA4Q8WW22 397 aaPredicted RBP9.74□□□□□ -0.85
PDGFD-202ENST00000393158 LHPPQ9H008 270 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 FANCFQ9NPI8 374 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 MRTO4Q9UKD2 239 aaKnown RBP9.74□□□□□ -0.85
PDGFD-202ENST00000393158 MSRB2Q9Y3D2 182 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 COL12A1Q99715 3063 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 GNB5O14775 395 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 RBMS1P29558 406 aaKnown RBP9.74□□□□□ -0.85
PDGFD-202ENST00000393158 SLC35A2P78381 396 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 COX10Q12887 443 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 IL18R1Q13478 541 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 CBFBQ13951 182 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 RFX4Q33E94 735 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 MISPQ8IVT2 679 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 EXD3Q8N9H8 876 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 TMCO6Q96DC7 493 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 SLC19A3Q9BZV2 496 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 OR11A1Q9GZK7 315 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 B3GAT1Q9P2W7 334 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 CDC40O60508 579 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDGFD-202ENST00000393158 PSKH1P11801 424 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 CDH15P55291 814 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 SUMO3P55854 103 aaPredicted RBP9.74□□□□□ -0.85
PDGFD-202ENST00000393158 GFRA1P56159 465 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 ZNF730Q6ZMV8 503 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 VASH1Q7L8A9 365 aaPredicted RBP9.74□□□□□ -0.85
PDGFD-202ENST00000393158 DND1Q8IYX4 353 aaKnown RBP9.74□□□□□ -0.85
PDGFD-202ENST00000393158 CADM2Q8N3J6 435 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 IL22RA1Q8N6P7 574 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 OR5M1Q8NGP8 315 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 GNPDA2Q8TDQ7 276 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 TBL1XR1Q9BZK7 514 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 DUSP21Q9H596 190 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 HHATLQ9HCP6 504 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 C12orf4Q9NQ89 552 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 DNAJC13O75165 2243 aa9.74□□□□□ -0.85
PDGFD-202ENST00000393158 MED12LQ86YW9 2145 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 MCIDASD6RGH6 385 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 CDC20Q12834 499 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 C6orf141Q5SZD1 244 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 BROXQ5VW32 411 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 SLC30A6Q6NXT4 461 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 GGNQ86UU5 652 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 GALNT16Q8N428 558 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 CAPSLQ8WWF8 208 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 TNFRSF13CQ96RJ3 184 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 HIF3AQ9Y2N7 669 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 SLC1A7O00341 560 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 XPNPEP2O43895 674 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 CELA3AP09093 270 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 DNASE1L1P49184 302 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 SMIM11AP58511 58 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 H3F3AP84243 136 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 FAM209AQ5JX71 171 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 GTF2IRD2BQ6EKJ0 949 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 GTF2IRD2Q86UP8 949 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 MOSPD2Q8NHP6 518 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 PTP4A1Q93096 173 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 ADGRG7Q96K78 797 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 PLA2G3Q9NZ20 509 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 HSPE1-MOB4S4R3N1 261 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 IGSF10Q6WRI0 2623 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 SLC6A8P48029 635 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 SNRPGP62308 76 aaKnown RBP9.73□□□□□ -0.85
PDGFD-202ENST00000393158 PIGFQ07326 219 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 HYAL4Q2M3T9 481 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 OPN5Q6U736 354 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 B3GNT6Q6ZMB0 384 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 GRINAQ7Z429 371 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 LNX2Q8N448 690 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 LINC00471Q8N535 108 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 CCNL2Q96S94 520 aaPredicted RBP9.73□□□□□ -0.85
PDGFD-202ENST00000393158 RBM38Q9H0Z9 239 aaKnown RBP9.73□□□□□ -0.85
PDGFD-202ENST00000393158 ING2Q9H160 280 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 OR52D1Q9H346 318 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 NRIP3Q9NQ35 241 aa9.73□□□□□ -0.85
PDGFD-202ENST00000393158 USP24Q9UPU5 2620 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms