RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 ZNF337Q9Y3M9 751 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 ADAM18Q9Y3Q7 739 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 OR10H1Q9Y4A9 318 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 HEATR5AQ86XA9 2040 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 NOTOA8MTQ0 251 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 ARPC3O15145 178 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 ARL6IP5O75915 188 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 OR7A10O76100 309 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 BLKP51451 505 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 PGDP52209 483 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 MAZP56270 477 aaKnown RBP11.28□□□□□ -0.6
RFC5-201ENST00000392542 SIRPAP78324 504 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 FUT7Q11130 342 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 PON3Q15166 354 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.28□□□□□ -0.6
RFC5-201ENST00000392542 Q5BKY6 102 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 SLC35D3Q5M8T2 416 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 BICRALQ6AI39 1079 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 NPEPL1Q8NDH3 523 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 OR5H6Q8NGV6 325 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 OR4C3Q8NH37 302 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 SNX33Q8WV41 574 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 C3orf49Q96BT1 292 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 ZNF578Q96N58 590 aaPredicted RBP11.28□□□□□ -0.6
RFC5-201ENST00000392542 GFM1Q96RP9 751 aaKnown RBP11.28□□□□□ -0.6
RFC5-201ENST00000392542 DDOQ99489 341 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 LRRC61Q9BV99 259 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 ZCCHC4Q9H5U6 513 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 NIPAL2Q9H841 368 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 GALNT9Q9HCQ5 603 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 ING3Q9NXR8 418 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 CACNG2Q9Y698 323 aa11.28□□□□□ -0.6
RFC5-201ENST00000392542 OR2W5A6NFC9 320 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 CENPBD1B2RD01 187 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 FLRT2O43155 660 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 ZNF749O43361 778 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 GATBO75879 557 aaKnown RBP11.27□□□□□ -0.6
RFC5-201ENST00000392542 C1QBP02746 253 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 UCHL1P09936 223 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 ATF1P18846 271 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 MAOAP21397 527 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 GZMKP49863 264 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 FAPQ12884 760 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 ISXQ2M1V0 245 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 CEP78Q5JTW2 689 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.27□□□□□ -0.6
RFC5-201ENST00000392542 PARGQ86W56 976 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 ZNF440Q8IYI8 595 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 ZFAND1Q8TCF1 268 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 ZNRF4Q8WWF5 429 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 AKAP1Q92667 903 aaKnown RBP eCLIP11.27□□□□□ -0.6
RFC5-201ENST00000392542 TCTN2Q96GX1 697 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 MAP3K3Q99759 626 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 TRAF4Q9BUZ4 470 aaPredicted RBP11.27□□□□□ -0.6
RFC5-201ENST00000392542 GPR174Q9BXC1 333 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 MFRPQ9BY79 579 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 NRIP3Q9NQ35 241 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 MCUBQ9NWR8 336 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 NCDNQ9UBB6 729 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 COPS3Q9UNS2 423 aa11.27□□□□□ -0.6
RFC5-201ENST00000392542 CACNA1IQ9P0X4 2223 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 SPTBP11277 2137 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 A0A1W2PPK0 400 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 SELENOFO60613 162 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 EPXP11678 715 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 SPI1P17947 270 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 EDNRAP25101 427 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 BTCP35070 178 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 LTBRP36941 435 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 RAB25P57735 213 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 RPS11P62280 158 aaKnown RBP eCLIP11.27□□□□□ -0.61
RFC5-201ENST00000392542 RPS4XP62701 263 aaKnown RBP11.27□□□□□ -0.61
RFC5-201ENST00000392542 GXYLT1Q4G148 440 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 COL13A1Q5TAT6 717 aaPredicted RBP11.27□□□□□ -0.61
RFC5-201ENST00000392542 SLITRK4Q8IW52 837 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 ZNF615Q8N8J6 731 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 KLHDC7BQ96G42 594 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 MRPL48Q96GC5 212 aaKnown RBP11.27□□□□□ -0.61
RFC5-201ENST00000392542 NECTIN4Q96NY8 510 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 NMNAT3Q96T66 252 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 NMNAT2Q9BZQ4 307 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 SLC19A3Q9BZV2 496 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 GNG8Q9UK08 70 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 MAU2Q9Y6X3 613 aa11.27□□□□□ -0.61
RFC5-201ENST00000392542 TRBV2A0A0J9YWF9 115 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 OR6C68A6NDL8 312 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 SHISA7A6NL88 538 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 IMPA2O14732 288 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 UBL3O95164 117 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 SNRPBP14678 240 aaKnown RBP11.26□□□□□ -0.61
RFC5-201ENST00000392542 ERVK-25P63136 954 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 NTRK2Q16620 822 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 CCDC58Q4VC31 144 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 OVCH1Q7RTY7 1134 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 ZPLD1Q8TCW7 415 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 RASD2Q96D21 266 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 HSPA12BQ96MM6 686 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 ZNF285Q96NJ3 590 aa11.26□□□□□ -0.61
RFC5-201ENST00000392542 CCNL2Q96S94 520 aaPredicted RBP11.26□□□□□ -0.61
RFC5-201ENST00000392542 GPX7Q96SL4 187 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms