RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ZMAT3Q9HA38 289 aaKnown RBP13.24□□□□□ -0.29
RTF1-201ENST00000389629 NPFFR2Q9Y5X5 522 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 ARRDC5A6NEK1 342 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 E9PI62 339 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 GAPDHSO14556 408 aaPredicted RBP13.24□□□□□ -0.29
RTF1-201ENST00000389629 HENMT1Q5T8I9 393 aaKnown RBP13.24□□□□□ -0.29
RTF1-201ENST00000389629 NAXEQ8NCW5 288 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 OR52B4Q8NGK2 314 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 MED17Q9NVC6 651 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 MIA3Q5JRA6 1907 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 TMEM82A0PJX8 343 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 RAB19A4D1S5 217 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 OIP5O43482 229 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 FBXO24O75426 580 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 TSPAN15O95858 294 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 LGI1O95970 557 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 PLGP00747 810 aaPredicted RBP13.23□□□□□ -0.29
RTF1-201ENST00000389629 GIPP09681 153 aaPredicted RBP13.23□□□□□ -0.29
RTF1-201ENST00000389629 RAB6AP20340 208 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 CTXN1P60606 82 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 EIF2B1Q14232 305 aaKnown RBP13.23□□□□□ -0.29
RTF1-201ENST00000389629 OR1Q1Q15612 314 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 ARL14Q8N4G2 192 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 FOXN4Q96NZ1 517 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 TNFRSF13CQ96RJ3 184 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 SLC38A1Q9H2H9 487 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.23□□□□□ -0.29
RTF1-201ENST00000389629 EPHA6Q9UF33 1036 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 POMT2Q9UKY4 750 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 WASH3PC4AMC7 463 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 CD160O95971 181 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 RAB40ALP0C0E4 278 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 MBOAT2Q6ZWT7 520 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 TMPRSS9Q7Z410 1059 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 RAB40AQ8WXH6 277 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 SEC61A2Q9H9S3 476 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 INPP5EQ9NRR6 644 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 A0A0D9SG52 128 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 A0A1W2PP55 124 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 CCSO14618 274 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 FOXK2Q01167 660 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 C12orf73Q69YU5 71 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 GDF7Q7Z4P5 450 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 C3orf49Q96BT1 292 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 KLK11Q9UBX7 282 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 RBM7Q9Y580 266 aaKnown RBP13.23□□□□□ -0.29
RTF1-201ENST00000389629 TCRBV16S1A1N1A0A5B0 115 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 K7ESM1 405 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 TMPRSS11DO60235 418 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 HCKP08631 526 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 FUT1P19526 365 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 MVDP53602 400 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 TNK1Q13470 666 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 ZNF628Q5EBL2 1059 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 PRRT3Q5FWE3 981 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 BPIFB2Q8N4F0 458 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 CLRN3Q8NCR9 226 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 DUSP18Q8NEJ0 188 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 FBLIM1Q8WUP2 373 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 BCL7CQ8WUZ0 217 aaPredicted RBP13.23□□□□□ -0.29
RTF1-201ENST00000389629 FAM46BQ96A09 425 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 SLC25A44Q96H78 314 aaPredicted RBP13.23□□□□□ -0.29
RTF1-201ENST00000389629 SCGB3A2Q96PL1 93 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 TMEM231Q9H6L2 316 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 HRASLSQ9HDD0 168 aa13.23□□□□□ -0.29
RTF1-201ENST00000389629 TTLL8A6PVC2 850 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 TO15178 435 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 NDUFS1P28331 727 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 ZNF550Q7Z398 422 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 OR51S1Q8NGJ8 323 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 GPR148Q8TDV2 347 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 ZFPM2Q8WW38 1151 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 MARC2Q969Z3 335 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 RNF32Q9H0A6 362 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 CYSLTR2Q9NS75 346 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 C14orf166Q9Y224 244 aaKnown RBP13.22□□□□□ -0.29
RTF1-201ENST00000389629 TRIP12Q14669 1992 aaPredicted RBP13.22□□□□□ -0.29
RTF1-201ENST00000389629 PRAMEF4O60810 478 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 FPR3P25089 353 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 AKT2P31751 481 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 VIPR2P41587 438 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 PPT1P50897 306 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 PDZK1IP1Q13113 114 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 ARHGAP19Q14CB8 494 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 PRAMEF9Q5VWM5 478 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 LCN10Q6JVE6 187 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 RPL22L1Q6P5R6 122 aaKnown RBP13.22□□□□□ -0.29
RTF1-201ENST00000389629 LAS2Q8IYD9 372 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 NANPQ8TBE9 248 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 SFXN5Q8TD22 340 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 TMEM106CQ9BVX2 250 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 BTBD2Q9BX70 525 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 HCAR1Q9BXC0 346 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 SMIM3Q9BZL3 60 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 MBD1Q9UIS9 605 aaPredicted RBP13.22□□□□□ -0.29
RTF1-201ENST00000389629 ATXN7L1Q9ULK2 861 aaPredicted RBP13.22□□□□□ -0.29
RTF1-201ENST00000389629 M0QYG6 137 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 ATG12O94817 140 aa13.22□□□□□ -0.29
RTF1-201ENST00000389629 ZNF888P0CJ79 500 aaPredicted RBP13.22□□□□□ -0.29
RTF1-201ENST00000389629 PTHLHP12272 177 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms