RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 HSD11B1P28845 292 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 SEC61A1P61619 476 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF616Q08AN1 781 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 DEFB115Q30KQ5 88 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR5M10Q6IEU7 315 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 ULK3Q6PHR2 472 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 FIGLAQ6QHK4 219 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 SIRT6Q8N6T7 355 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR2T27Q8NH04 317 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 LRRC46Q96FV0 321 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 G6PC3Q9BUM1 346 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 NXF2Q9GZY0 626 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 C17orf113A0A1B0GUU1 675 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 AGAP14A8MT82 685 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 B4DGG1 531 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 RFXAPO00287 272 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 FFAR1O14842 300 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 F13BP05160 661 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 PRKAR1BP31321 381 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 LUMP51884 338 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 LSM11P83369 360 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■■□ 22.6
TRAPPC9-201ENST00000389328 FBXO42Q6P3S6 717 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 CAMKMTQ7Z624 323 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF761Q86XN6 746 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC39A11Q8N1S5 342 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 PXT1Q8NFP0 134 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 TSACCQ96A04 125 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 FAM46BQ96A09 425 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 TMEM106AQ96A25 262 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 PHB2Q99623 299 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZDHHC5Q9C0B5 715 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 GREB1LQ9C091 1923 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 KIAA0100Q14667 2235 aaKnown RBP12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 H7C1C5 153 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 FKTNO75072 461 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 AHSA1O95433 338 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 POU3F3P20264 500 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 RIDAP52758 137 aaKnown RBP12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 LCN6P62502 163 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 IL13RA1P78552 427 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 EIF4EBP2Q13542 120 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 ABCA11PQ4W5N1 156 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 NIPAL3Q6P499 406 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC35F3Q8IY50 421 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR13C3Q8NGS6 347 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 BCL7CQ8WUZ0 217 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 EIF5A2Q9GZV4 153 aaKnown RBP12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 RGCCQ9H4X1 137 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC25A19Q9HC21 320 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 PRTFDC1Q9NRG1 225 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 STARD5Q9NSY2 213 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 KLK11Q9UBX7 282 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 SSC5DA1L4H1 1573 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 A0A1W2PR48 441 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 NPIPA5E9PKD4 350 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF593O00488 134 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 CLUP10909 449 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 MVDP53602 400 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 REEP5Q00765 189 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 HNRNPA1L2Q32P51 320 aaKnown RBP12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF776Q68DI1 518 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 UNQ6126/PRO20091Q6UXV3 157 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 RNF165Q6ZSG1 346 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 CMTM4Q8IZR5 234 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR51D1Q8NGF3 324 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 GOT1L1Q8NHS2 421 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 MAFIPQ8WZ33 124 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 RADILQ96JH8 1075 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 SCGB3A2Q96PL1 93 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 DERL3Q96Q80 235 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 SGPP1Q9BX95 441 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 C1QTNF6Q9BXI9 259 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 SEMA4CQ9C0C4 833 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 HRH4Q9H3N8 390 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 NPIPA1Q9UND3 350 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 TMEM82A0PJX8 343 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 ACSM4P0C7M7 580 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 GP1BBP13224 206 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 GDI1P31150 447 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC6A9P48067 706 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 GRM7Q14831 915 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 RNF113BQ8IZP6 322 aaKnown RBP12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 LSMEM1Q8N8F7 131 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 DUSP18Q8NEJ0 188 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 MMABQ96EY8 250 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 PEX11GQ96HA9 241 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 HRASLSQ9HDD0 168 aa12.18□□□□□ -0.46
TRAPPC9-201ENST00000389328 C1orf196B1AJZ1 125 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 H3BUI4 141 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 LCMT2O60294 686 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 CXCL3P19876 107 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 RBMXP38159 391 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 CBX5P45973 191 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 ST3GAL2Q16842 350 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 PRSS42Q7Z5A4 293 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC51BQ86UW2 128 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 BPIFB2Q8N4F0 458 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 KLHL15Q96M94 604 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 ABHD1Q96SE0 405 aa12.17□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC38A3Q99624 504 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms