RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 ALG12Q9BV10 488 aa1.23□□□□□ -2.21
RNU6-541P-201ENST00000384709 RSPO3Q9BXY4 272 aaPredicted RBP1.23□□□□□ -2.21
RNU6-541P-201ENST00000384709 DEFB127Q9H1M4 99 aa1.23□□□□□ -2.21
RNU6-541P-201ENST00000384709 TREM2Q9NZC2 230 aa1.23□□□□□ -2.21
RNU6-541P-201ENST00000384709 GNG12Q9UBI6 72 aa1.23□□□□□ -2.21
RNU6-541P-201ENST00000384709 OPN4Q9UHM6 478 aa1.23□□□□□ -2.21
RNU6-541P-201ENST00000384709 MFHAS1Q9Y4C4 1052 aa1.23□□□□□ -2.21
RNU6-541P-201ENST00000384709 ALG6Q9Y672 507 aa1.23□□□□□ -2.21
RNU6-541P-201ENST00000384709 SVILO95425 2214 aa1.23□□□□□ -2.21
RNU6-541P-201ENST00000384709 PNPLA6Q8IY17 1366 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 SF3B1O75533 1304 aaKnown RBP eCLIP1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 MAP3K15Q6ZN16 1313 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 A0A087WZY1 265 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 A0A0G2JLM5 398 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 A0A1W2PQ67 120 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 A6NIZ1 184 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 VSTM2BA6NLU5 285 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 TRDCB7Z8K6 153 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 G3V4G9 280 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 KIF2AO00139 706 aaPredicted RBP1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 OR1F1O43749 312 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 SS18L1O75177 396 aaPredicted RBP1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 NEBLO76041 1014 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 MFN2O95140 757 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 KLF8O95600 359 aaPredicted RBP1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 SLC25A27O95847 323 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 MBD3O95983 291 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 IGLV2-23P01705 113 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 CALB2P22676 271 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 MAPK3P27361 379 aaPredicted RBP1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 FGF9P31371 208 aaPredicted RBP1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 HPCAL1P37235 193 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 P2RY1P47900 373 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 RAP1BP61224 184 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 TNFRSF17Q02223 184 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 TGFBR3Q03167 851 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 GGTLC2Q14390 218 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 MXD4Q14582 209 aaPredicted RBP1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 PTGES3Q15185 160 aaKnown RBP1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 SLC25A52Q3SY17 297 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 C5orf47Q569G3 176 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 FRMPD2BQ6IN97 320 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 CNSTQ6PJW8 725 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 IGFL1Q6UW32 110 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 ZNF621Q6ZSS3 439 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 MFSD6LQ8IWD5 586 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 LRRC43Q8N309 656 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 FTMTQ8N4E7 242 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 Q8N976 141 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 OR4D9Q8NGE8 314 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 NDRG1Q92597 394 aaKnown RBP1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 LRRC58Q96CX6 371 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 PAGE5Q96GU1 130 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 SEC22AQ96IW7 307 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 TUBGCP2Q9BSJ2 902 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 SPATA16Q9BXB7 569 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 MEAF6Q9HAF1 191 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 CCL28Q9NRJ3 127 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 ZNF282Q9UDV7 671 aaPredicted RBP1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 ZNF223Q9UK11 482 aaPredicted RBP1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 AK6Q9Y3D8 172 aaKnown RBP1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 DENND4AQ7Z401 1863 aa1.22□□□□□ -2.21
RNU6-541P-201ENST00000384709 PLEKHH1Q9ULM0 1364 aa1.21□□□□□ -2.21
RNU6-541P-201ENST00000384709 C2orf16Q68DN1 1984 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 KRT87PA6NCN2 255 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 SLC31A2O15432 143 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 MED6O75586 246 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 STAMBPO95630 424 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 CD5P06127 495 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 PNMA6AP0CW24 399 aaPredicted RBP1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 RBMY1CP0DJD4 496 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 POU2F1P14859 743 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 TBPP20226 339 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 CMA1P23946 247 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 MMP11P24347 488 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 CYP2F1P24903 491 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 CXCR2P25025 360 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 CALCRP30988 508 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 ATP6V1E1P36543 226 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 LONP1P36776 959 aaKnown RBP1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 DDOSTP39656 456 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 MAP3K8P41279 467 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 NMUP48645 174 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 TDO2P48775 406 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 ARRB1P49407 418 aaPredicted RBP1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 GMFBP60983 142 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 SELENOTP62341 195 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 CNTN2Q02246 1040 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 VGLL4Q14135 290 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 GRB7Q14451 532 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 MESDQ14696 234 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 PSG5Q15238 335 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 TATDN3Q17R31 274 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 FAM83EQ2M2I3 478 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 DEFB116Q30KQ4 102 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 PARP15Q460N3 678 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 C1orf220Q5T0J3 134 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 ATL3Q6DD88 541 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 PYHIN1Q6K0P9 492 aa1.21□□□□□ -2.22
RNU6-541P-201ENST00000384709 ZSCAN25Q6NSZ9 544 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms