RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 CBR3O75828 277 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 HK1P19367 917 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 CRHBPP24387 322 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 PCYT1AP49585 367 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 DSCR4P56555 118 aaPredicted RBP24.25■■□□□ 1.47
MSX1-201ENST00000382723 TOMM20Q15388 145 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 TSPAN14Q8NG11 270 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 KLHL1Q9NR64 748 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 TUBA8Q9NY65 449 aaPredicted RBP24.25■■□□□ 1.47
MSX1-201ENST00000382723 EML6Q6ZMW3 1958 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 BLOC1S5-TXNDC5H3BN57 136 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 EFNA2O43921 213 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 NPIPB7O75200 414 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 ATP6V1B1P15313 513 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 EEF1B2P24534 225 aaKnown RBP24.25■■□□□ 1.47
MSX1-201ENST00000382723 STK35Q8TDR2 534 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 SLC39A7Q92504 469 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 SLC38A2Q96QD8 506 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 PTDSS2Q9BVG9 487 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 TEX12Q9BXU0 123 aa24.25■■□□□ 1.47
MSX1-201ENST00000382723 MED13Q9UHV7 2174 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 A0A087WZY1 265 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 PINLYPA6NC86 204 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 H3BML4 177 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 TLX2O43763 284 aaPredicted RBP24.24■■□□□ 1.47
MSX1-201ENST00000382723 MPZL2O60487 215 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 BGLAPP02818 100 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 SMIM18P0DKX4 95 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 PEPDP12955 493 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 MFAP5Q13361 173 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 TOP3AQ13472 1001 aaPredicted RBP24.24■■□□□ 1.47
MSX1-201ENST00000382723 IGFN1Q86VF2 1251 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 FDCSPQ8NFU4 85 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 ZBTB8AQ96BR9 441 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 TMEM185BQ9H7F4 350 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 SERINC1Q9NRX5 453 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 GPR52Q9Y2T5 361 aa24.24■■□□□ 1.47
MSX1-201ENST00000382723 OR5H15A6NDH6 313 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 NDUFB2O95178 105 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 AHSA1O95433 338 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 TFPIP10646 304 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 GTF2A1P52655 376 aaPredicted RBP24.23■■□□□ 1.47
MSX1-201ENST00000382723 NUDT6P53370 316 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 OR8J1Q8NGP2 316 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 LIPHQ8WWY8 451 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 SGCDQ92629 289 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 DDIT4LQ96D03 193 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 UBL7Q96S82 380 aaPredicted RBP24.23■■□□□ 1.47
MSX1-201ENST00000382723 POLDIP3Q9BY77 421 aaKnown RBP24.23■■□□□ 1.47
MSX1-201ENST00000382723 LRRC3CA6NJW4 275 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 PTGES3LE9PB15 166 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 BHLHE40O14503 412 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 FAM20BO75063 409 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 PPP1R3DO95685 299 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 OPN1LWP04000 364 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 HIST1H2ABP04908 130 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 ASAH2BP0C7U1 165 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 SLC6A6P31641 620 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 EIF1P41567 113 aaKnown RBP24.23■■□□□ 1.47
MSX1-201ENST00000382723 SNRPGP62308 76 aaKnown RBP24.23■■□□□ 1.47
MSX1-201ENST00000382723 BLMHQ13867 455 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 SLC35F1Q5T1Q4 408 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 FAM69AQ5T7M9 428 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 HIST3H2AQ7L7L0 130 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 BCDIN3DQ7Z5W3 292 aaKnown RBP24.23■■□□□ 1.47
MSX1-201ENST00000382723 TRUB1Q8WWH5 349 aaKnown RBP24.23■■□□□ 1.47
MSX1-201ENST00000382723 HIST1H2ACQ93077 130 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 ARL5BQ96KC2 179 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 PRRG3Q9BZD7 231 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 FKRPQ9H9S5 495 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 AMBNQ9NP70 447 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 CLN6Q9NWW5 311 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 ZNF229Q9UJW7 825 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 ZFHX4Q86UP3 3567 aa24.23■■□□□ 1.47
MSX1-201ENST00000382723 RFPL3SP0C7P2 107 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 RPL4P36578 427 aaKnown RBP24.22■■□□□ 1.47
MSX1-201ENST00000382723 ARG2P78540 354 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 RAET1LQ5VY80 246 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 MOSPD2Q8NHP6 518 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 PLEKHA8Q96JA3 519 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 FAM173AQ9BQD7 235 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 RHNO1Q9BSD3 238 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 DNAJC27Q9NZQ0 273 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 BLOC1S6Q9UL45 172 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 MCIDASD6RGH6 385 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 SURF4O15260 269 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 ZNF208O43345 1280 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 ZIC3O60481 467 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 SLC2A10O95528 541 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 CCDC159P0C7I6 412 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 AQP2P41181 271 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 RPS4XP62701 263 aaKnown RBP24.22■■□□□ 1.47
MSX1-201ENST00000382723 SLC6A19Q695T7 634 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 C5orf46Q6UWT4 87 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 NANOGNBQ7Z5D8 188 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 SULF2Q8IWU5 870 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 OR2M7Q8NG81 312 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 ZNF566Q969W8 418 aa24.22■■□□□ 1.47
MSX1-201ENST00000382723 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.22■■□□□ 1.47
MSX1-201ENST00000382723 SEC14L4Q9UDX3 406 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms