RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 CSNK1EP49674 416 aaKnown RBP13.91□□□□□ -0.18
VLDLR-202ENST00000382099 ARSIQ5FYB1 569 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 POMZP3Q6PJE2 187 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 C6orf120Q7Z4R8 191 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 STEAP2Q8NFT2 490 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 OR4D11Q8NGI4 311 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 SULT4A1Q9BR01 284 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 LMAN2LQ9H0V9 348 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 WNT5BQ9H1J7 359 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 CRLF2Q9HC73 371 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 ZDHHC8Q9ULC8 765 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 KCNIP3Q9Y2W7 256 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 A0A0B4J2A0 478 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 CPSF4LA6NMK7 179 aaKnown RBP13.9□□□□□ -0.18
VLDLR-202ENST00000382099 ADRB3P13945 408 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 GNSP15586 552 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 CDK5Q00535 292 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 HYAL4Q2M3T9 481 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 LDLRAD1Q5T700 205 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 TMEM99Q8N816 258 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 GPR32P1Q8NGA4 272 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 CD99L2Q8TCZ2 262 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 RGP1Q92546 391 aaPredicted RBP13.9□□□□□ -0.18
VLDLR-202ENST00000382099 ZNF354BQ96LW1 612 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 PAAF1Q9BRP4 392 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 TRIM62Q9BVG3 475 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 TRMT61BQ9BVS5 477 aaKnown RBP13.9□□□□□ -0.18
VLDLR-202ENST00000382099 METTL9Q9H1A3 318 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 SHPKQ9UHJ6 478 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 GBF1Q92538 1859 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 KIAA0355O15063 1070 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 TGM5O43548 720 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 NUTF2P61970 127 aaKnown RBP13.9□□□□□ -0.18
VLDLR-202ENST00000382099 PJVKQ0ZLH3 352 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 CBFBQ13951 182 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 ZNF239Q16600 458 aaKnown RBP13.9□□□□□ -0.18
VLDLR-202ENST00000382099 NDUFA9Q16795 377 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 UBE2R2Q712K3 238 aaPredicted RBP13.9□□□□□ -0.18
VLDLR-202ENST00000382099 BHLHA9Q7RTU4 235 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 PARGQ86W56 976 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 PPP1R3BQ86XI6 285 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 SLC25A36Q96CQ1 311 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 BSCL2Q96G97 398 aaPredicted RBP13.9□□□□□ -0.18
VLDLR-202ENST00000382099 TMEM19Q96HH6 336 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 IP6K3Q96PC2 410 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 ASB8Q9H765 288 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 SYNPO2LQ9H987 977 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 DUSP22Q9NRW4 184 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 MMACHCQ9Y4U1 282 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 CKAP5Q14008 2032 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 GFYI3L273 518 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 NTN1O95631 604 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 ARAFP10398 606 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 VAMP1P23763 118 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 RGRP47804 291 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 STXBP1P61764 594 aaKnown RBP13.9□□□□□ -0.18
VLDLR-202ENST00000382099 MAPK14Q16539 360 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 DCAF4L1Q3SXM0 396 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 SCGB2B2Q4G0G5 96 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 ALKAL1Q6UXT8 129 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 UMODL1-AS1Q8N2C9 162 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 RNF141Q8WVD5 230 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 MICU1Q9BPX6 476 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 SLC25A18Q9H1K4 315 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 NOP16Q9Y3C1 178 aaKnown RBP13.9□□□□□ -0.18
VLDLR-202ENST00000382099 ZNF337Q9Y3M9 751 aa13.9□□□□□ -0.18
VLDLR-202ENST00000382099 CASTOR2A6NHX0 329 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 RNASEK-C17orf49H0YIS7 233 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 OR2F2O95006 317 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 FAUP35544 74 aaKnown RBP13.89□□□□□ -0.19
VLDLR-202ENST00000382099 ASMTP46597 345 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 ST8SIA6P61647 398 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 OR2F1Q13607 317 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 DHCR24Q15392 516 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 POGLUT1Q8NBL1 392 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 FAM46AQ96IP4 442 aaKnown RBP13.89□□□□□ -0.19
VLDLR-202ENST00000382099 NDC1Q9BTX1 674 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 OR51V1Q9H2C8 321 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 PRDM5Q9NQX1 630 aaPredicted RBP13.89□□□□□ -0.19
VLDLR-202ENST00000382099 MRPS18AQ9NVS2 196 aaKnown RBP13.89□□□□□ -0.19
VLDLR-202ENST00000382099 NPFFR2Q9Y5X5 522 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 RANBP2P49792 3224 aaKnown RBP13.89□□□□□ -0.19
VLDLR-202ENST00000382099 ZNF726A6NNF4 738 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 UBE2NLQ5JXB2 153 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 LIPNQ5VXI9 398 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 FAM111BQ6SJ93 734 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 PRSS55Q6UWB4 352 aaPredicted RBP13.89□□□□□ -0.19
VLDLR-202ENST00000382099 NAXEQ8NCW5 288 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 GHSRQ92847 366 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 PHYHIPLQ96FC7 376 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 MED8Q96G25 268 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 C16orf70Q9BSU1 422 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 MMP26Q9NRE1 261 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 ALPK3Q96L96 1907 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 DNAH14Q0VDD8 3507 aa13.89□□□□□ -0.19
VLDLR-202ENST00000382099 ST6GAL1P15907 406 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 IER5LQ5T953 404 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 KHDRBS2Q5VWX1 349 aaKnown RBP13.88□□□□□ -0.19
VLDLR-202ENST00000382099 OR2A2Q6IF42 318 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 GDPD4Q6W3E5 623 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms