RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 OGG1O15527 345 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 GREM1O60565 184 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 ZIC2O95409 532 aaPredicted RBP13.81□□□□□ -0.2
CTNS-202ENST00000381870 CKMP06732 381 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 CLDN2P57739 230 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 TAS2R20P59543 309 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 BLOC1S1P78537 153 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 FOXK2Q01167 660 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 TMEM115Q12893 351 aaPredicted RBP13.81□□□□□ -0.2
CTNS-202ENST00000381870 MAP2K5Q13163 448 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 PCGF3Q3KNV8 242 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 C4orf46Q504U0 113 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 PRAMEF14Q5SWL7 426 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 TMIEQ8NEW7 156 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 OR52L1Q8NGH7 329 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 DUSP19Q8WTR2 217 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 SETD7Q8WTS6 366 aaKnown RBP13.81□□□□□ -0.2
CTNS-202ENST00000381870 ZNF471Q9BX82 626 aaPredicted RBP13.81□□□□□ -0.2
CTNS-202ENST00000381870 MS4A8Q9BY19 250 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 TLNRD1Q9H1K6 362 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 MARCH5Q9NX47 278 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 WSB2Q9NYS7 404 aaPredicted RBP13.81□□□□□ -0.2
CTNS-202ENST00000381870 COL4A3Q01955 1670 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 TRBV2A0A0J9YWF9 115 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 A0A1W2PS29 197 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 SYNDIG1LA6NDD5 238 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 GNB5O14775 395 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 SULT1B1O43704 296 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 FCMRO60667 390 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 ERAL1O75616 437 aaKnown RBP13.8□□□□□ -0.2
CTNS-202ENST00000381870 NFYBP25208 207 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 PSMB10P40306 273 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 DUSP2Q05923 314 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 SNTB1Q13884 538 aaKnown RBP13.8□□□□□ -0.2
CTNS-202ENST00000381870 CRMP1Q14194 572 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 C22orf39Q6P5X5 142 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 TMEM173Q86WV6 379 aaPredicted RBP13.8□□□□□ -0.2
CTNS-202ENST00000381870 TMEM151BQ8IW70 566 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 LINC01599Q8WXQ3 324 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 NR4A3Q92570 626 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 MRPL48Q96GC5 212 aaKnown RBP13.8□□□□□ -0.2
CTNS-202ENST00000381870 FAM83CQ9BQN1 747 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 ZFP57Q9NU63 452 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 SIDT1Q9NXL6 827 aaKnown RBP13.8□□□□□ -0.2
CTNS-202ENST00000381870 MKL2Q9ULH7 1088 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 KANTRA0A1W2PQU2 76 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 SCAMP1O15126 338 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 SMIM6P0DI80 62 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 GATMP50440 423 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 TGM3Q08188 693 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 PLA2G7Q13093 441 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 PDZK1IP1Q13113 114 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 COL19A1Q14993 1142 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 H3F3CQ6NXT2 135 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 FUT10Q6P4F1 479 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 TMEM71Q6P5X7 295 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 C5orf46Q6UWT4 87 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 LNX2Q8N448 690 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 TCEAL3Q969E4 200 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 HS6ST2Q96MM7 605 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 MNTQ99583 582 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 MFRPQ9BY79 579 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 CMC2Q9NRP2 79 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 ZNF629Q9UEG4 869 aaPredicted RBP13.8□□□□□ -0.2
CTNS-202ENST00000381870 ZNF337Q9Y3M9 751 aa13.8□□□□□ -0.2
CTNS-202ENST00000381870 LCMT2O60294 686 aaKnown RBP13.79□□□□□ -0.2
CTNS-202ENST00000381870 ACTL6AO96019 429 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 C8orf89P0DMQ9 161 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 BMP7P18075 431 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 SLC2A5P22732 501 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 NR0B1P51843 470 aaKnown RBP13.79□□□□□ -0.2
CTNS-202ENST00000381870 TAS2R38P59533 333 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 MPPED2Q15777 294 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 ARSIQ5FYB1 569 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 LY6G6FQ5SQ64 297 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 FAM109BQ6ICB4 259 aaPredicted RBP13.79□□□□□ -0.2
CTNS-202ENST00000381870 WDR88Q6ZMY6 472 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 CCDC116Q8IYX3 515 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 OVCA2Q8WZ82 227 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 OR7D2Q96RA2 312 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 CD180Q99467 661 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 Q9Y3F1 56 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 A0A0D9SG52 128 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 FAM86C2PA6NEL3 165 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 MAN2B1O00754 1011 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 EDNRAP25101 427 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 SIRPAP78324 504 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 STX4Q12846 297 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 MLC1Q15049 377 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 NDUFAF6Q330K2 333 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 MORN1Q5T089 497 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 UBE3DQ7Z6J8 389 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 NUDT13Q86X67 352 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 KCNRGQ8N5I3 272 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 TRAM1L1Q8N609 369 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 OR51S1Q8NGJ8 323 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 EDARADDQ8WWZ3 215 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 BBS4Q96RK4 519 aa13.79□□□□□ -0.2
CTNS-202ENST00000381870 VRK1Q99986 396 aaPredicted RBP13.79□□□□□ -0.2
CTNS-202ENST00000381870 PCOLCE2Q9UKZ9 415 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms