RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 TRPC5OSA6NMA1 111 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 AKR7A3O95154 331 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 DBIP07108 87 aaKnown RBP12.43□□□□□ -0.42
SHOX-202ENST00000381575 PRG2P13727 222 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 IDUAP35475 653 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 CRATP43155 626 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 HTR3AP46098 478 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 ANXA11P50995 505 aaKnown RBP12.43□□□□□ -0.42
SHOX-202ENST00000381575 MVDP53602 400 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 SLC35A1P78382 337 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 CEACAM7Q14002 265 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 OR7A5Q15622 319 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 GABRA6Q16445 453 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 TSPO2Q5TGU0 170 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 DTX2Q86UW9 622 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 P2RY8Q86VZ1 359 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 PEX5LQ8IYB4 626 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 TMEM99Q8N816 258 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 OR52P1PQ8NH57 321 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 VPS33AQ96AX1 596 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 CACNG6Q9BXT2 260 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 P2RX2Q9UBL9 471 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 TRAPPC4Q9Y296 219 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 B3GALT5Q9Y2C3 310 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 FRS3O43559 492 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 DNPH1O43598 174 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 SSX4O60224 188 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 ZNF500O60304 480 aaPredicted RBP12.43□□□□□ -0.42
SHOX-202ENST00000381575 SLC22A3O75751 556 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 ANP32DO95626 131 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 KRT75O95678 551 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 THBS1P07996 1170 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 CDH2P19022 906 aaPredicted RBP12.43□□□□□ -0.42
SHOX-202ENST00000381575 CD40P25942 277 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 CLK1P49759 484 aaKnown RBP12.43□□□□□ -0.42
SHOX-202ENST00000381575 DSTNP60981 165 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 MAGOHP61326 146 aaKnown RBP12.43□□□□□ -0.42
SHOX-202ENST00000381575 IRX1P78414 480 aaPredicted RBP12.43□□□□□ -0.42
SHOX-202ENST00000381575 LGALS3BPQ08380 585 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 GNA13Q14344 377 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 SLC17A1Q14916 467 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 PDCD4Q53EL6 469 aaKnown RBP12.43□□□□□ -0.42
SHOX-202ENST00000381575 OTUD3Q5T2D3 398 aaPredicted RBP12.43□□□□□ -0.42
SHOX-202ENST00000381575 TMEM108Q6UXF1 575 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 CLIP4Q8N3C7 705 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 WDR31Q8NA23 367 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 ZNF385AQ96PM9 386 aaKnown RBP12.43□□□□□ -0.42
SHOX-202ENST00000381575 NAA11Q9BSU3 229 aaPredicted RBP12.43□□□□□ -0.42
SHOX-202ENST00000381575 UPB1Q9UBR1 384 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 ZNF443Q9Y2A4 671 aaPredicted RBP12.43□□□□□ -0.42
SHOX-202ENST00000381575 SLC9A8Q9Y2E8 581 aa12.43□□□□□ -0.42
SHOX-202ENST00000381575 IGHV4-30-2A0A087WSY4 118 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 CDHR4A6H8M9 788 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 LIPT2A6NK58 231 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 PDLIM1O00151 329 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 ZNF208O43345 1280 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 EIF1BO60739 113 aaKnown RBP12.42□□□□□ -0.42
SHOX-202ENST00000381575 NUDT7P0C024 238 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 IDO1P14902 403 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 CXCR1P25024 350 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 ACAA2P42765 397 aaKnown RBP12.42□□□□□ -0.42
SHOX-202ENST00000381575 HOXC5Q00444 222 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 DMTNQ08495 405 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 LIN52Q52LA3 116 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 C6orf10Q5SRN2 563 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 C11orf71Q6IPW1 123 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 PAQR6Q6TCH4 344 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 KLHL17Q6TDP4 642 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 GPAT4Q86UL3 456 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 ZIC4Q8N9L1 334 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 GLB1L3Q8NCI6 653 aaPredicted RBP12.42□□□□□ -0.42
SHOX-202ENST00000381575 OR9K2Q8NGE7 335 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 SLC38A5Q8WUX1 472 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 TMEM19Q96HH6 336 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 ADAM19Q9H013 955 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 MANSC1Q9H8J5 431 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 TPT1P8Q9HAU6 139 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 FAIMQ9NVQ4 179 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 ADPRHL2Q9NX46 363 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 CHST2Q9Y4C5 530 aa12.42□□□□□ -0.42
SHOX-202ENST00000381575 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.41□□□□□ -0.42
SHOX-202ENST00000381575 DSPPQ9NZW4 1301 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 FAAHO00519 579 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 IL6P05231 212 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 UQCRBP14927 111 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 PTAFRP25105 342 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 FKBP2P26885 142 aaKnown RBP12.41□□□□□ -0.42
SHOX-202ENST00000381575 TTKP33981 857 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 NUDT6P53370 316 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 ETFDHQ16134 617 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 HIKESHIQ53FT3 197 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 AGAP6Q5VW22 663 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 ATG16L1Q676U5 607 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 SLC2A7Q6PXP3 512 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 DNM1P46Q6ZS02 220 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 SERPINA11Q86U17 422 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 PMM1Q92871 262 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 MAL2Q969L2 176 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 RADILQ96JH8 1075 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 MAELQ96JY0 434 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms