RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 ST8SIA6P61647 398 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 RPS15P62841 145 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 PRRT3Q5FWE3 981 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 ADAM5Q6NVV9 412 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 NUBPLQ8TB37 319 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 SP7Q8TDD2 431 aaPredicted RBP17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 MRPL38Q96DV4 380 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 SLC35G5Q96KT7 338 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 SEC11CQ9BY50 192 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 ELP3Q9H9T3 547 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 DMRT3Q9NQL9 472 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 ZCCHC3Q9NUD5 404 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 METTL1Q9UBP6 276 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 TRAV1-2A0A0B4J238 106 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 MPC1LP0DKB6 136 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 NME1P15531 152 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 ST3GAL3Q11203 375 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 ARSIQ5FYB1 569 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 INO80EQ8NBZ0 244 aaPredicted RBP17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 ZNF740Q8NDX6 193 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 OR5P2Q8WZ92 322 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 DVL3Q92997 716 aaPredicted RBP17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 ISOC2Q96AB3 205 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 OTUB2Q96DC9 234 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 LURAP1Q96LR2 239 aa17.55■□□□□ 0.4
SMARCD1-201ENST00000381513 A0A1B0GTQ1 180 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 H3BNC9 293 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 M0QZ92 97 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 OR2F2O95006 317 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 CATP04040 527 aaKnown RBP17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 CLUP10909 449 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 FUT1P19526 365 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 PBLDP30039 288 aaPredicted RBP17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 OMPP47874 163 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 OR2F1Q13607 317 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 DBX2Q6ZNG2 339 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 TMPRSS5Q9H3S3 457 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 NOX4Q9NPH5 578 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 MED17Q9NVC6 651 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 ZNF337Q9Y3M9 751 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 NPIPB15A6NHN6 443 aaPredicted RBP17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 MUC1P15941 1255 aaPredicted RBP17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 F2RL1P55085 397 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 HYAL4Q2M3T9 481 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 ZNF311Q5JNZ3 666 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 ZNF620Q6ZNG0 422 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 NDUFAF7Q7L592 441 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 OR52L1Q8NGH7 329 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 TMED6Q8WW62 240 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 TRMT61BQ9BVS5 477 aaKnown RBP17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 TCF7L1Q9HCS4 588 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 GKN1Q9NS71 199 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 DYRK1BQ9Y463 629 aa17.54■□□□□ 0.4
SMARCD1-201ENST00000381513 PTPRDP23468 1912 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 TRBV2A0A0J9YWF9 115 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 GGT3PA6NGU5 568 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 HEXAP06865 529 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 BMP7P18075 431 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 NT5EP21589 574 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 CERS1P27544 350 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 ZNF280AP59817 542 aaPredicted RBP17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 ELAVL1Q15717 326 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 SLCO4C1Q6ZQN7 724 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 C11orf96Q7Z7L8 435 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 EID2Q8N6I1 236 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 SNX33Q8WV41 574 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 MYLIPQ8WY64 445 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 HIST1H2BAQ96A08 127 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 BBS4Q96RK4 519 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 PDGFDQ9GZP0 370 aaPredicted RBP17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 WSB2Q9NYS7 404 aaPredicted RBP17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 NOP16Q9Y3C1 178 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 MBLAC1A4D2B0 266 aaPredicted RBP17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 TMEM202A6NGA9 273 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 VEGFDO43915 354 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 IGLV3-27P01718 113 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 LIPCP11150 499 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 ATP1B2P14415 290 aaPredicted RBP17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 LAG3P18627 525 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 GABRR2P28476 465 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 LAP3P28838 519 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 CASP6P55212 293 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 TAS2R20P59543 309 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 AIMP2Q13155 320 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 ADGRF1Q5T601 910 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 LILRA3Q8N6C8 439 aaPredicted RBP17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 RNASE11Q8TAA1 199 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 SLAMF9Q96A28 289 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 PHYHIPLQ96FC7 376 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 ZCCHC2Q9C0B9 1178 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 TOLLIPQ9H0E2 274 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 NRIP3Q9NQ35 241 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 FOXJ3Q9UPW0 622 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 PRG3Q9Y2Y8 225 aaPredicted RBP17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 A6NLC8 198 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 M0QZQ0 153 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 SLC16A5O15375 505 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 EPPINO95925 133 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 CD53P19397 219 aa17.53■□□□□ 0.4
SMARCD1-201ENST00000381513 DUSP28Q4G0W2 176 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms