RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 RASSF5Q8WWW0 418 aa13.18□□□□□ -0.3
VCX3B-201ENST00000381029 RNASE6Q93091 150 aaKnown RBP13.18□□□□□ -0.3
VCX3B-201ENST00000381029 DDIT4LQ96D03 193 aa13.18□□□□□ -0.3
VCX3B-201ENST00000381029 DNAJA3Q96EY1 480 aa13.18□□□□□ -0.3
VCX3B-201ENST00000381029 MCHR1Q99705 422 aa13.18□□□□□ -0.3
VCX3B-201ENST00000381029 ZNF426Q9BUY5 554 aa13.18□□□□□ -0.3
VCX3B-201ENST00000381029 KLHL13Q9P2N7 655 aa13.18□□□□□ -0.3
VCX3B-201ENST00000381029 MPDZO75970 2070 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 NDUFAB1O14561 156 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 PRKD3O94806 890 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 TFPIP10646 304 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 GGT1P19440 569 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 TNFRSF1BP20333 461 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 EDNRAP25101 427 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 CCKARP32238 428 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 SLC16A1P53985 500 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 CDH12P55289 794 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 SELENOWP63302 87 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 SIRPAP78324 504 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 RNPS1Q15287 305 aaKnown RBP13.17□□□□□ -0.3
VCX3B-201ENST00000381029 ALG10BQ5I7T1 473 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 ENTPD8Q5MY95 495 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 SWT1Q5T5J6 900 aaKnown RBP13.17□□□□□ -0.3
VCX3B-201ENST00000381029 C1orf140Q5VVS0 124 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 ZNF613Q6PF04 617 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 CBLL1Q75N03 491 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 NUFIP2Q7Z417 695 aaKnown RBP13.17□□□□□ -0.3
VCX3B-201ENST00000381029 TSEN54Q7Z6J9 526 aaKnown RBP13.17□□□□□ -0.3
VCX3B-201ENST00000381029 TUSC5Q8IXB3 177 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 BCAS4Q8TDM0 211 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 KTI12Q96EK9 354 aaPredicted RBP13.17□□□□□ -0.3
VCX3B-201ENST00000381029 PRRG4Q9BZD6 226 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 OPN3Q9H1Y3 402 aaPredicted RBP13.17□□□□□ -0.3
VCX3B-201ENST00000381029 APCP25054 2843 aa13.17□□□□□ -0.3
VCX3B-201ENST00000381029 FREM1Q5H8C1 2179 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 ZNF724A8MTY0 619 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 EEF1E1-BLOC1S5C9J1V9 151 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 EEF1E1O43324 174 aaKnown RBP13.16□□□□□ -0.3
VCX3B-201ENST00000381029 YES1P07947 543 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 PNMTP11086 282 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 PRF1P14222 555 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 FPR1P21462 350 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 FUT4P22083 530 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 IDUAP35475 653 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 CEACAM7Q14002 265 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 LRRC23Q53EV4 343 aaPredicted RBP13.16□□□□□ -0.3
VCX3B-201ENST00000381029 PAQR6Q6TCH4 344 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 LUZP2Q86TE4 346 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 RANBP3LQ86VV4 465 aaPredicted RBP13.16□□□□□ -0.3
VCX3B-201ENST00000381029 CARM1Q86X55 608 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 CCDC103Q8IW40 242 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 RNF148Q8N7C7 305 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 CNEP1R1Q8N9A8 125 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 ZNF610Q8N9Z0 462 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 RBM15BQ8NDT2 890 aaKnown RBP13.16□□□□□ -0.3
VCX3B-201ENST00000381029 MFSD8Q8NHS3 518 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 VANGL1Q8TAA9 524 aaPredicted RBP13.16□□□□□ -0.3
VCX3B-201ENST00000381029 ADAMTS16Q8TE57 1224 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 SLC47A1Q96FL8 570 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 NSL1Q96IY1 281 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 ZNF300Q96RE9 604 aaPredicted RBP13.16□□□□□ -0.3
VCX3B-201ENST00000381029 KCTD14Q9BQ13 255 aaPredicted RBP13.16□□□□□ -0.3
VCX3B-201ENST00000381029 PRSS27Q9BQR3 290 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 TMEM27Q9HBJ8 222 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 GALNT8Q9NY28 637 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 FOXD3Q9UJU5 478 aaPredicted RBP13.16□□□□□ -0.3
VCX3B-201ENST00000381029 BAG5Q9UL15 447 aa13.16□□□□□ -0.3
VCX3B-201ENST00000381029 CHP2O43745 196 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 EIF1BO60739 113 aaKnown RBP13.15□□□□□ -0.3
VCX3B-201ENST00000381029 IFNA14P01570 189 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 NCK1P16333 377 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 OR1E2P47887 323 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 OR2B6P58173 313 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 SLC35A1P78382 337 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 SORDQ00796 357 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 LTBQ06643 244 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 GTF2IRD2BQ6EKJ0 949 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 PPP4R4Q6NUP7 873 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 TFAP2EQ6VUC0 442 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 MEX3BQ6ZN04 569 aaKnown RBP13.15□□□□□ -0.3
VCX3B-201ENST00000381029 VTCN1Q7Z7D3 282 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 GTF2IRD2Q86UP8 949 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 DEFB107AQ8IZN7 70 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 TMEM99Q8N816 258 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 ZIC4Q8N9L1 334 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 FAM156AQ8NDB6 213 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 SLC26A7Q8TE54 656 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 TAAR8Q969N4 342 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 CDRT15Q96T59 188 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 TMEM43Q9BTV4 400 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 RBM24Q9BX46 236 aaKnown RBP13.15□□□□□ -0.3
VCX3B-201ENST00000381029 KLHL9Q9P2J3 617 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 SLC13A4Q9UKG4 626 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 SLC9A8Q9Y2E8 581 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 SH3GLB1Q9Y371 365 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 EMC9Q9Y3B6 208 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 SNX13Q9Y5W8 968 aa13.15□□□□□ -0.3
VCX3B-201ENST00000381029 TRAPPC13A5PLN9 417 aa13.14□□□□□ -0.31
VCX3B-201ENST00000381029 AQP7P3A6NL99 342 aa13.14□□□□□ -0.31
VCX3B-201ENST00000381029 ELOA3DA6NLF2 546 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms