RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 FAM86C1Q9NVL1 165 aa17.55■□□□□ 0.4
GMDS-201ENST00000380805 YARS2Q9Y2Z4 477 aaKnown RBP17.55■□□□□ 0.4
GMDS-201ENST00000380805 MUC6Q6W4X9 2439 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 CDC14CA4D256 554 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 CDC40O60508 579 aaKnown RBP eCLIP17.54■□□□□ 0.4
GMDS-201ENST00000380805 ALOX12BO75342 701 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 FGF5P12034 268 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 CD53P19397 219 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 CCR4P51679 360 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 FABP5Q01469 135 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 FCRLBQ6BAA4 426 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 SLC23A3Q6PIS1 610 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 B3GLCTQ6Y288 498 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 OR52E2Q8NGJ4 325 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 IFI44Q8TCB0 444 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 NMNAT2Q9BZQ4 307 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 BABAM2Q9NXR7 383 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 QPCTLQ9NXS2 382 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 POLHQ9Y253 713 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 SLC6A5Q9Y345 797 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 UGT2A1Q9Y4X1 527 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 IER3IP1Q9Y5U9 82 aa17.54■□□□□ 0.4
GMDS-201ENST00000380805 SLC35F4A4IF30 521 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 NDUFB5O43674 189 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 CBFA2T3O75081 653 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 HLA-DPB1P04440 258 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 CLUP10909 449 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 UQCRC1P31930 480 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 GRK6P43250 576 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 IL10RAQ13651 578 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 TBC1D25Q3MII6 688 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 C22orf42Q6IC83 251 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 PPP1R3BQ86XI6 285 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 GPALPP1Q8IXQ4 340 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 POMGNT2Q8NAT1 580 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 CYB561A3Q8NBI2 242 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 OR5W2Q8NH69 310 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 C1GALT1C1Q96EU7 318 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 WDFY2Q96P53 400 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 KLHDC3Q9BQ90 382 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 OR51V1Q9H2C8 321 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 SMURF1Q9HCE7 757 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 FBXL4Q9UKA2 621 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 GSTK1Q9Y2Q3 226 aa17.53■□□□□ 0.4
GMDS-201ENST00000380805 PNMA8CA0A1B0GUJ8 204 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 DAPL1A0PJW8 107 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 ISPDA4D126 451 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 NTN3O00634 580 aaPredicted RBP17.52■□□□□ 0.4
GMDS-201ENST00000380805 IMPA2O14732 288 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 UPK1BO75841 260 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 HEXBP07686 556 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 TACR3P29371 465 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 TRA2AQ13595 282 aaKnown RBP eCLIP17.52■□□□□ 0.42e-6■■■□□ 15.9
GMDS-201ENST00000380805 ZNF181Q2M3W8 571 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.52■□□□□ 0.4
GMDS-201ENST00000380805 SLC35D3Q5M8T2 416 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 SHISA6Q6ZSJ9 500 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 FAM122BQ7Z309 247 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 MARCH3Q86UD3 253 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 NPEPL1Q8NDH3 523 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 ATP6V1C2Q8NEY4 427 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 OR8K3Q8NH51 312 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 ATOH1Q92858 354 aaPredicted RBP17.52■□□□□ 0.4
GMDS-201ENST00000380805 TMEM203Q969S6 136 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 SPSB2Q99619 263 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 TM9SF2Q99805 663 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 WDR77Q9BQA1 342 aaPredicted RBP17.52■□□□□ 0.4
GMDS-201ENST00000380805 TBL1XR1Q9BZK7 514 aa17.52■□□□□ 0.4
GMDS-201ENST00000380805 ISG20L2Q9H9L3 353 aaKnown RBP17.52■□□□□ 0.4
GMDS-201ENST00000380805 GPR179Q6PRD1 2367 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.52■□□□□ 0.39
GMDS-201ENST00000380805 HCRTR2O43614 444 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 SNX4O95219 450 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 TXNDC12O95881 172 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 CELP19835 753 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 PGCP20142 388 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 EVI2BP34910 448 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 DUSP3P51452 185 aaPredicted RBP17.52■□□□□ 0.39
GMDS-201ENST00000380805 RPS7P62081 194 aaKnown RBP17.52■□□□□ 0.39
GMDS-201ENST00000380805 ZNF85Q03923 595 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 EFR3AQ14156 821 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 IL11RAQ14626 422 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 CRTC2Q53ET0 693 aaPredicted RBP17.52■□□□□ 0.39
GMDS-201ENST00000380805 LCN1P1Q5VSP4 162 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 KLBQ86Z14 1044 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 MISPQ8IVT2 679 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 PARP16Q8N5Y8 322 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 SDR9C7Q8NEX9 313 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 OR4K13Q8NH42 304 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 ZNF563Q8TA94 476 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 RNF138Q8WVD3 245 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 SMPDL3BQ92485 455 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 MOGAT1Q96PD6 335 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 FKRPQ9H9S5 495 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 TRIM36Q9NQ86 728 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 NANSQ9NR45 359 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 SNTG1Q9NSN8 517 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 ZNF229Q9UJW7 825 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 ADAM18Q9Y3Q7 739 aa17.52■□□□□ 0.39
GMDS-201ENST00000380805 PCDHGB6Q9Y5F9 930 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms