RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 MARCH9Q86YJ5 346 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 ZNF441Q8N8Z8 693 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 POC5Q8NA72 575 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 OR4D9Q8NGE8 314 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 OR5W2Q8NH69 310 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 SETD6Q8TBK2 473 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 TP53INP1Q96A56 240 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 TMED9Q9BVK6 235 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 ISG20L2Q9H9L3 353 aaKnown RBP21.11■□□□□ 0.97
VPS16-201ENST00000380443 MCIDASD6RGH6 385 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 GNB5O14775 395 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 ACTA2P62736 377 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 ACTG2P63267 376 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 MXD1Q05195 221 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 PLCXD2Q0VAA5 305 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 TCF15Q12870 199 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 PON3Q15166 354 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 ZNF74Q16587 644 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 C1orf189Q5VU69 101 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 TSSK4Q6SA08 328 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 APOOLQ6UXV4 268 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 EGFL6Q8IUX8 553 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 ZFP41Q8N8Y5 198 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 NEIL3Q8TAT5 605 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 SAP25Q8TEE9 199 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 KIAA1143Q96AT1 154 aaPredicted RBP21.11■□□□□ 0.97
VPS16-201ENST00000380443 CNN2Q99439 309 aaKnown RBP21.11■□□□□ 0.97
VPS16-201ENST00000380443 ZNF229Q9UJW7 825 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 PILRBQ9UKJ0 227 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 ZC3H12DA2A288 527 aaKnown RBP21.1■□□□□ 0.97
VPS16-201ENST00000380443 CCR4P51679 360 aa21.1■□□□□ 0.97
VPS16-201ENST00000380443 NR0B1P51843 470 aaKnown RBP21.1■□□□□ 0.97
VPS16-201ENST00000380443 CLPPQ16740 277 aaPredicted RBP21.1■□□□□ 0.97
VPS16-201ENST00000380443 FCRLBQ6BAA4 426 aa21.1■□□□□ 0.97
VPS16-201ENST00000380443 VASNQ6EMK4 673 aa21.1■□□□□ 0.97
VPS16-201ENST00000380443 SYS1Q8N2H4 156 aa21.1■□□□□ 0.97
VPS16-201ENST00000380443 GATSQ8NAP1 163 aa21.1■□□□□ 0.97
VPS16-201ENST00000380443 CYB561A3Q8NBI2 242 aa21.1■□□□□ 0.97
VPS16-201ENST00000380443 OR4K13Q8NH42 304 aa21.1■□□□□ 0.97
VPS16-201ENST00000380443 ZNF563Q8TA94 476 aa21.1■□□□□ 0.97
VPS16-201ENST00000380443 SNRNP27Q8WVK2 155 aaKnown RBP21.1■□□□□ 0.97
VPS16-201ENST00000380443 DDOQ99489 341 aa21.1■□□□□ 0.97
VPS16-201ENST00000380443 OIP5O43482 229 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 CDC40O60508 579 aaKnown RBP eCLIP21.09■□□□□ 0.97
VPS16-201ENST00000380443 ICOSLGO75144 302 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 ONECUT2O95948 504 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 APOA1P02647 267 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 PTBP1P26599 531 aaKnown RBP eCLIP21.09■□□□□ 0.97
VPS16-201ENST00000380443 MTNR1BP49286 362 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 DIO1P49895 249 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 PPP3R1P63098 170 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 HSF2Q03933 536 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 DNASE1L3Q13609 305 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 EMC4Q5J8M3 183 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 MZT2AQ6P582 158 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 XKRXQ6PP77 449 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 B3GLCTQ6Y288 498 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 VASH1Q7L8A9 365 aaPredicted RBP21.09■□□□□ 0.97
VPS16-201ENST00000380443 LRRC17Q8N6Y2 441 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 NAT6Q93015 286 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 TMCO6Q96DC7 493 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 NMNAT2Q9BZQ4 307 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 NANSQ9NR45 359 aa21.09■□□□□ 0.97
VPS16-201ENST00000380443 CD1AP06126 327 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 CLEC2LP0C7M8 214 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 MYF5P13349 255 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 TDGF1P13385 188 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 PGCP20142 388 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 EFNA3P52797 238 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 SLC25A1P53007 311 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 ZNF85Q03923 595 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 METAP1DQ6UB28 335 aaPredicted RBP21.08■□□□□ 0.97
VPS16-201ENST00000380443 CBLN3Q6UW01 205 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 COX15Q7KZN9 410 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 MS4A15Q8N5U1 240 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 NPEPL1Q8NDH3 523 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 FAM83FQ8NEG4 500 aaPredicted RBP21.08■□□□□ 0.97
VPS16-201ENST00000380443 ACOT12Q8WYK0 555 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 OMA1Q96E52 524 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 HDHD5Q9BXW7 423 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 RERGLQ9H628 205 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 MMP25Q9NPA2 562 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 WDR70Q9NW82 654 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 V9GYH0 126 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 ADAMTS20P59510 1910 aa21.08■□□□□ 0.97
VPS16-201ENST00000380443 NDUFB5O43674 189 aa21.08■□□□□ 0.96
VPS16-201ENST00000380443 TXNDC12O95881 172 aa21.08■□□□□ 0.96
VPS16-201ENST00000380443 CD14P08571 375 aa21.08■□□□□ 0.96
VPS16-201ENST00000380443 GTF2E2P29084 291 aaKnown RBP21.08■□□□□ 0.96
VPS16-201ENST00000380443 FAAH2Q6GMR7 532 aa21.08■□□□□ 0.96
VPS16-201ENST00000380443 ZNF574Q6ZN55 896 aaPredicted RBP21.08■□□□□ 0.96
VPS16-201ENST00000380443 MISPQ8IVT2 679 aa21.08■□□□□ 0.96
VPS16-201ENST00000380443 SDR9C7Q8NEX9 313 aa21.08■□□□□ 0.96
VPS16-201ENST00000380443 ATOH1Q92858 354 aaPredicted RBP21.08■□□□□ 0.96
VPS16-201ENST00000380443 PHOX2BQ99453 314 aa21.08■□□□□ 0.96
VPS16-201ENST00000380443 SDHCQ99643 169 aaPredicted RBP21.08■□□□□ 0.96
VPS16-201ENST00000380443 TBL1XR1Q9BZK7 514 aa21.08■□□□□ 0.96
VPS16-201ENST00000380443 A0A1W2PQL4 384 aaPredicted RBP21.07■□□□□ 0.96
VPS16-201ENST00000380443 CYC1P08574 325 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 ASAH2BP0C7U1 165 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms