RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 MAGEB4O15481 346 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-201ENST00000379433 FABP1P07148 127 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 JUNBP17275 347 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-201ENST00000379433 SLC3A1Q07837 685 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 CRYZQ08257 329 aaKnown RBP9.95□□□□□ -0.82
NEDD9-201ENST00000379433 DUSP8Q13202 625 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 ILKQ13418 452 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 INSL4Q14641 139 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 TSC22D1Q15714 1073 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 TUSC1Q2TAM9 212 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 UBE2UQ5VVX9 321 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 DCDC5Q6ZRR9 648 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 ATCAYQ86WG3 371 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 CPOQ8IVL8 374 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 CENPSQ8N2Z9 138 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 NLGN4YQ8NFZ3 816 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-201ENST00000379433 MAFAQ8NHW3 353 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-201ENST00000379433 PHOSPHO1Q8TCT1 267 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 SHDQ96IW2 340 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 ABCB10Q9NRK6 738 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 PTGFRNQ9P2B2 879 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 FBXL4Q9UKA2 621 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 RPH3ALQ9UNE2 315 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 HSPE1-MOB4S4R3N1 261 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 LOC400499M0QZD8 3231 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 CACNA1GO43497 2377 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 TEX51A0A1B0GUA7 166 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 FCER2P06734 321 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF12P17014 697 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 ITPKBP27987 946 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 SMSP52788 366 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 CAV3P56539 151 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 IFITM2Q01629 132 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 DNASE1L3Q13609 305 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 C14orf28Q4W4Y0 310 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 SYT14P1Q58G82 188 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 PLAG1Q6DJT9 500 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 C3orf33Q6P1S2 294 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 LRRC17Q8N6Y2 441 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 OR8J1Q8NGP2 316 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 DIO2Q92813 273 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 C1GALT1C1Q96EU7 318 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 RNFT2Q96EX2 444 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 FOLH1BQ9HBA9 442 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 SNTG1Q9NSN8 517 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 LMO7DNF2Z398 122 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 BMP7P18075 431 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 MAKP20794 623 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 NUDT1P36639 197 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 WNT5AP41221 380 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 RGS6P49758 472 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 RIDAP52758 137 aaKnown RBP9.94□□□□□ -0.82
NEDD9-201ENST00000379433 CXCR4P61073 352 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 OCLNQ16625 522 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 SYT6Q5T7P8 510 aaPredicted RBP9.94□□□□□ -0.82
NEDD9-201ENST00000379433 ARHGAP40Q5TG30 622 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 C5orf46Q6UWT4 87 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 TCTN2Q96GX1 697 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 SENP5Q96HI0 755 aaPredicted RBP9.94□□□□□ -0.82
NEDD9-201ENST00000379433 LURAP1Q96LR2 239 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 OPN3Q9H1Y3 402 aaPredicted RBP9.94□□□□□ -0.82
NEDD9-201ENST00000379433 MOV10Q9HCE1 1003 aaKnown RBP9.94□□□□□ -0.82
NEDD9-201ENST00000379433 LYRM4Q9HD34 91 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 CUTCQ9NTM9 273 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 RPS6KB2Q9UBS0 482 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 FMO6PO60774 539 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 SLITRK5O94991 958 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 CSTAP01040 98 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 ATP1B1P05026 303 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 GABRB1P18505 474 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 MYL12AP19105 171 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 AZGP1P25311 298 aaKnown RBP9.94□□□□□ -0.82
NEDD9-201ENST00000379433 CDH11P55287 796 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 ARHGAP11BQ3KRB8 267 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 ALG10BQ5I7T1 473 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 LANCL3Q6ZV70 420 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 FAM174AQ8TBP5 190 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 FBLIM1Q8WUP2 373 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 THRSPQ92748 146 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 CDC6Q99741 560 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF559Q9BR84 538 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 RACGAP1Q9H0H5 632 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 OR10A5Q9H207 317 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 RYDENQ9NUL5 291 aaKnown RBP9.94□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF749O43361 778 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 KIAA0513O60268 411 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 RFPL3O75679 317 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 GRPRP30550 384 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 RPL4P36578 427 aaKnown RBP9.94□□□□□ -0.82
NEDD9-201ENST00000379433 HCCSP53701 268 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 NXPH1P58417 271 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 CFHR1Q03591 330 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 SPHARQ15513 63 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 LIPNQ5VXI9 398 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 ATP6V1C2Q8NEY4 427 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 OR4Q3Q8NH05 313 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 TMEM239Q8WW34 195 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 C5orf34Q96MH7 638 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF582Q96NG8 517 aaPredicted RBP9.94□□□□□ -0.82
NEDD9-201ENST00000379433 SLC38A2Q96QD8 506 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms