RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 GTF2IRD2BQ6EKJ0 949 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 LCN8Q6JVE9 175 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 FCRLAQ7L513 359 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 GTF2IRD2Q86UP8 949 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 DHFR2Q86XF0 187 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 LIX1LQ8IVB5 337 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 SLC43A2Q8N370 569 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 FAM86B1Q8N7N1 296 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 RNF128Q8TEB7 428 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 INTS12Q96CB8 462 aaKnown RBP16.75■□□□□ 0.27
SSU72-203ENST00000378725 C7orf34Q96L11 122 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 PRSS27Q9BQR3 290 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 ZNF426Q9BUY5 554 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 PTDSS2Q9BVG9 487 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 CADM1Q9BY67 442 aaKnown RBP16.75■□□□□ 0.27
SSU72-203ENST00000378725 GLRX2Q9NS18 164 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.75■□□□□ 0.27
SSU72-203ENST00000378725 SLC7A7Q9UM01 511 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 PHF3Q92576 2039 aaKnown RBP16.75■□□□□ 0.27
SSU72-203ENST00000378725 SMAD9O15198 467 aaKnown RBP16.74■□□□□ 0.27
SSU72-203ENST00000378725 CYTIPO60759 359 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 SEMG1P04279 462 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 GPIP06744 558 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 ATP6V1B2P21281 511 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 FPR1P21462 350 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 OPRM1P35372 400 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 OR2B6P58173 313 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 TAS2R41P59536 307 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 WDR88Q6ZMY6 472 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 OR6S1Q8NH40 331 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 MFSD8Q8NHS3 518 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 RNF217Q8TC41 542 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 KTI12Q96EK9 354 aaPredicted RBP16.74■□□□□ 0.27
SSU72-203ENST00000378725 DNAJA3Q96EY1 480 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 PRRC1Q96M27 445 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 SFXN3Q9BWM7 321 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 GP6Q9HCN6 339 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 ENPP4Q9Y6X5 453 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 KIAA1549Q9HCM3 1950 aa16.74■□□□□ 0.27
SSU72-203ENST00000378725 NCOA6Q14686 2063 aaPredicted RBP16.73■□□□□ 0.27
SSU72-203ENST00000378725 MYO18BQ8IUG5 2567 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 TRAV36DV7A0A075B6V5 113 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 IGHV3-15A0A0B4J1V0 119 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 A0A1W2PNV4 684 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 TCRBV5S2A0A599 114 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 FTCDNL1E5RQL4 147 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 EBAG9O00559 213 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 FFAR1O14842 300 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 OR2T1O43869 369 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 EIF1BO60739 113 aaKnown RBP16.73■□□□□ 0.27
SSU72-203ENST00000378725 SS18L1O75177 396 aaPredicted RBP16.73■□□□□ 0.27
SSU72-203ENST00000378725 TNFSF13O75888 250 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 PRSS23O95084 383 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 CLDN14O95500 239 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 KLK2P20151 261 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 KIR2DL2P43627 348 aaPredicted RBP16.73■□□□□ 0.27
SSU72-203ENST00000378725 ST3GAL3Q11203 375 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 PDK3Q15120 406 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 RNPS1Q15287 305 aaKnown RBP16.73■□□□□ 0.27
SSU72-203ENST00000378725 IQCCQ4KMZ1 466 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 CYP2R1Q6VVX0 501 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 GCNT2Q8N0V5 402 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 CA5BP1Q8WTZ4 195 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 POP5Q969H6 163 aaKnown RBP16.73■□□□□ 0.27
SSU72-203ENST00000378725 TAAR8Q969N4 342 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 ZHX1-C8orf76Q96EF9 292 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 GMPPAQ96IJ6 420 aaPredicted RBP16.73■□□□□ 0.27
SSU72-203ENST00000378725 PSMG3-AS1Q96PY0 264 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 LRMDAQ9H2I8 198 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 MMADHCQ9H3L0 296 aaPredicted RBP16.73■□□□□ 0.27
SSU72-203ENST00000378725 NDUFAF4Q9P032 175 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 ING1Q9UK53 422 aaPredicted RBP16.73■□□□□ 0.27
SSU72-203ENST00000378725 MYO7BQ6PIF6 2116 aa16.73■□□□□ 0.27
SSU72-203ENST00000378725 TENM4Q6N022 2769 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 J3KTA2 159 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 DVL2O14641 736 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 AHSA1O95433 338 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 IFNA8P32881 189 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 RPS5P46782 204 aaKnown RBP16.72■□□□□ 0.27
SSU72-203ENST00000378725 YAP1P46937 504 aaKnown RBP16.72■□□□□ 0.27
SSU72-203ENST00000378725 OR7A5Q15622 319 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 FAM69AQ5T7M9 428 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 PPP4R4Q6NUP7 873 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 TTC33Q6PID6 262 aaPredicted RBP16.72■□□□□ 0.27
SSU72-203ENST00000378725 PAQR6Q6TCH4 344 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 CCDC121Q6ZUS5 278 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 P3H2Q8IVL5 708 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 NKAIN4Q8IVV8 208 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 ABHD3Q8WU67 409 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 CCDC124Q96CT7 223 aaKnown RBP16.72■□□□□ 0.27
SSU72-203ENST00000378725 STARD4Q96DR4 205 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 EPYCQ99645 322 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 NAA11Q9BSU3 229 aaPredicted RBP16.72■□□□□ 0.27
SSU72-203ENST00000378725 TAPBPLQ9BX59 468 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 SLC19A3Q9BZV2 496 aa16.72■□□□□ 0.27
SSU72-203ENST00000378725 ARHGAP21Q5T5U3 1957 aa16.71■□□□□ 0.27
SSU72-203ENST00000378725 ZNF814B7Z6K7 855 aa16.71■□□□□ 0.27
SSU72-203ENST00000378725 RHCEP18577 417 aa16.71■□□□□ 0.27
SSU72-203ENST00000378725 RBM34P42696 430 aaKnown RBP16.71■□□□□ 0.27
SSU72-203ENST00000378725 VLDLRP98155 873 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms