RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 DDIT4LQ96D03 193 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 REPIN1Q9BWE0 567 aaKnown RBP16.88■□□□□ 0.29
CBWD3-204ENST00000377349 TPT1P8Q9HAU6 139 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 CISD1Q9NZ45 108 aaKnown RBP16.88■□□□□ 0.29
CBWD3-204ENST00000377349 NOSIPQ9Y314 301 aaKnown RBP16.88■□□□□ 0.29
CBWD3-204ENST00000377349 TMEM72A0PK05 275 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 TLX2O43763 284 aaPredicted RBP16.87■□□□□ 0.29
CBWD3-204ENST00000377349 NCF2P19878 526 aaPredicted RBP16.87■□□□□ 0.29
CBWD3-204ENST00000377349 HTR3AP46098 478 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 CRISP3P54108 245 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 LIN52Q52LA3 116 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 TIMM23BQ5SRD1 257 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 C11orf71Q6IPW1 123 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 MTDHQ86UE4 582 aaKnown RBP16.87■□□□□ 0.29
CBWD3-204ENST00000377349 ADGRG3Q86Y34 549 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 HIPK1Q86Z02 1210 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 CCDC103Q8IW40 242 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 ZNF433Q8N7K0 673 aaPredicted RBP16.87■□□□□ 0.29
CBWD3-204ENST00000377349 GOLGA6L1Q8N7Z2 621 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 OR52P1PQ8NH57 321 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 PIGXQ8TBF5 258 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 SLCO1B3Q9NPD5 702 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 SDR39U1Q9NRG7 319 aaPredicted RBP16.87■□□□□ 0.29
CBWD3-204ENST00000377349 B3GALT5Q9Y2C3 310 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 IGKV3D-15A0A087WSY6 115 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 CCT8L1PA6NM43 557 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 NR5A2O00482 541 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 ABCD4O14678 606 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 KLF11O14901 512 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 PMS2P2O95744 297 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 PTNP21246 168 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 NTF4P34130 210 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 CDH11P55287 796 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 APH1AQ96BI3 265 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 TMEM19Q96HH6 336 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 TCF7L2Q9NQB0 619 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 CALML5Q9NZT1 146 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 TMEM181Q9P2C4 612 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 OSGIN1Q9UJX0 560 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 HDGFL3Q9Y3E1 203 aa16.87■□□□□ 0.29
CBWD3-204ENST00000377349 IGHV4-30-2A0A087WSY4 118 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 CIB4A0PJX0 185 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 FAM234BA2RU67 622 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 OR5H1A6NKK0 313 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 ZNF716A6NP11 495 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 RAD51DO75771 328 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 CXCR1P25024 350 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 SLC1A3P43003 542 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 MAGEA8P43361 318 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 COPZ1P61923 177 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 EPS8Q12929 822 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 HMBOX1Q6NT76 420 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 EPGNQ6UW88 154 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 CASP12Q6UXS9 341 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 SLC38A5Q8WUX1 472 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 ATP6V1G3Q96LB4 118 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 YAE1D1Q9NRH1 226 aa16.86■□□□□ 0.29
CBWD3-204ENST00000377349 ZNF443Q9Y2A4 671 aaPredicted RBP16.86■□□□□ 0.29
CBWD3-204ENST00000377349 ZC3H12DA2A288 527 aaKnown RBP16.85■□□□□ 0.29
CBWD3-204ENST00000377349 E7EQL1 145 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 GPRIN2O60269 458 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 MRPL33O75394 65 aaKnown RBP16.85■□□□□ 0.29
CBWD3-204ENST00000377349 TP53P04637 393 aaPredicted RBP16.85■□□□□ 0.29
CBWD3-204ENST00000377349 GGT1P19440 569 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 RPS4Y1P22090 263 aaKnown RBP16.85■□□□□ 0.29
CBWD3-204ENST00000377349 IRX1P78414 480 aaPredicted RBP16.85■□□□□ 0.29
CBWD3-204ENST00000377349 SPOCK1Q08629 439 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 LARS2Q15031 903 aaKnown RBP16.85■□□□□ 0.29
CBWD3-204ENST00000377349 C9orf135Q5VTT2 229 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 P2RY8Q86VZ1 359 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 OR10H5Q8NGA6 315 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 MAL2Q969L2 176 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 MUCL1Q96DR8 90 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 THOC1Q96FV9 657 aaKnown RBP16.85■□□□□ 0.29
CBWD3-204ENST00000377349 HS6ST2Q96MM7 605 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 EBF4Q9BQW3 602 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 ALG2Q9H553 416 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 BARX1Q9HBU1 254 aaPredicted RBP16.85■□□□□ 0.29
CBWD3-204ENST00000377349 CCDC167Q9P0B6 97 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 PCDHB14Q9Y5E9 798 aa16.85■□□□□ 0.29
CBWD3-204ENST00000377349 A0A1W2PR80 420 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 CDHR4A6H8M9 788 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 C5orf58C9J3I9 102 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 NUDT7P0C024 238 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 IDH3AP50213 366 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 MVDP53602 400 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 AQP5P55064 265 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 FOXG1P55316 489 aaPredicted RBP16.84■□□□□ 0.29
CBWD3-204ENST00000377349 SLC35A1P78382 337 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 BNIP2Q12982 314 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 PDK3Q15120 406 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 OR7A5Q15622 319 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 MAPK11Q15759 364 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 TTMPQ5BVD1 217 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 B3GLCTQ6Y288 498 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 MSANTD1Q6ZTZ1 278 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 PHC2Q8IXK0 858 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 ZNF440Q8IYI8 595 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 OR52N5Q8NH56 324 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 C7orf26Q96N11 449 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms