RNA–Protein interactions for RNA: ENST00000377200.9

PTAR1-202, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene PTAR1, Length 9,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-202ENST00000377200 TSPAN11A1L157 253 aa3.79□□□□□ -1.8
PTAR1-202ENST00000377200 OR6C68A6NDL8 312 aa3.79□□□□□ -1.8
PTAR1-202ENST00000377200 PDYNP01213 254 aa3.79□□□□□ -1.8
PTAR1-202ENST00000377200 HLA-AP01891 365 aaKnown RBP3.79□□□□□ -1.8
PTAR1-202ENST00000377200 HYAL2Q12891 473 aa3.79□□□□□ -1.8
PTAR1-202ENST00000377200 TRIM61Q5EBN2 209 aa3.79□□□□□ -1.8
PTAR1-202ENST00000377200 FUNDC1Q8IVP5 155 aa3.79□□□□□ -1.8
PTAR1-202ENST00000377200 OR4K17Q8NGC6 315 aa3.79□□□□□ -1.8
PTAR1-202ENST00000377200 NEK7Q8TDX7 302 aa3.79□□□□□ -1.8
PTAR1-202ENST00000377200 APH1BQ8WW43 257 aa3.79□□□□□ -1.8
PTAR1-202ENST00000377200 GLYATL1Q969I3 302 aa3.79□□□□□ -1.8
PTAR1-202ENST00000377200 C5orf34Q96MH7 638 aa3.79□□□□□ -1.8
PTAR1-202ENST00000377200 DUXAA6NLW8 204 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 CACNB4O00305 520 aaPredicted RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 CCSO14618 274 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 IGHA2P01877 340 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 ZNF823P16415 610 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 GRK6P43250 576 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 YBEYP58557 167 aaPredicted RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 HNRNPKP61978 463 aaKnown RBP eCLIP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 P2RY14Q15391 338 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 ACER2Q5QJU3 275 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 NOXRED1Q6NXP6 359 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 CNKSR3Q6P9H4 555 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 TOMM20LQ6UXN7 152 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 NUDT13Q86X67 352 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 COMMD1Q8N668 190 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 FAM86B1Q8N7N1 296 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 ZNF417Q8TAU3 575 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 RAB24Q969Q5 203 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 PDXPQ96GD0 296 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 KIRREL1Q96J84 757 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 ESRP2Q9H6T0 727 aaKnown RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 LAMP5Q9UJQ1 280 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 PCDHGA2Q9Y5H1 932 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 V9GY05 133 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 PCDH8O95206 1070 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 PAPLNO95428 1278 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 CST2P09228 141 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 APEHP13798 732 aaKnown RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 NDUFB7P17568 137 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 ABCD3P28288 659 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 AKR1C3P42330 323 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 LCN6P62502 163 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 SPOCK1Q08629 439 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 TEAD2Q15562 447 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 C1orf220Q5T0J3 134 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 HLA-DQA1Q5Y7H0 255 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 CEACAM20Q6UY09 585 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 SH2D5Q6ZV89 423 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 ZNF534Q76KX8 674 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 NUP54Q7Z3B4 507 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 LRRC56Q8IYG6 542 aaPredicted RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 FAM24BQ8N5W8 94 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 KLHDC1Q8N7A1 406 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 ACVR1CQ8NER5 493 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 PROKR1Q8TCW9 393 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 HMCESQ96FZ2 354 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 TMEM169Q96HH4 297 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 CD180Q99467 661 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 RHNO1Q9BSD3 238 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 CHRDQ9H2X0 955 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 CRTAC1Q9NQ79 661 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 GPR173Q9NS66 373 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 SLAMF8Q9P0V8 285 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 DHDHQ9UQ10 334 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 SNX11Q9Y5W9 270 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 LOC390937A0A1W2PQ73 354 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 IQCF5A8MTL0 148 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 B4E171 279 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 DNASE2O00115 360 aaPredicted RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 DCTN6O00399 190 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 EIF1BO60739 113 aaKnown RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 IL5P05113 134 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 TNFRSF1BP20333 461 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 BMP8BP34820 402 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 EIF1P41567 113 aaKnown RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 NCBP2P52298 156 aaKnown RBP eCLIP3.78□□□□□ -1.84e-8■■□□□ 11.6
PTAR1-202ENST00000377200 ZNF33AQ06730 810 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 RPE65Q16518 533 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 WSCD1Q658N2 575 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 ANKRD34AQ69YU3 496 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 BMP8AQ7Z5Y6 402 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 LGALS14Q8TCE9 139 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 SMPDL3BQ92485 455 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 DPH7Q9BTV6 452 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 SLC5A7Q9GZV3 580 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 NSUN3Q9H649 340 aaKnown RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 A0A1W2PPH5 198 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 ZNF736B4DX44 427 aaPredicted RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 TMEM127O75204 238 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 RBMXL2O75526 392 aaKnown RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 HBE1P02100 147 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 ARAFP10398 606 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 OR1G1P47890 313 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 RNF144AP50876 292 aaPredicted RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 TPPP2P59282 170 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 LILRA4P59901 499 aa3.78□□□□□ -1.8
PTAR1-202ENST00000377200 SUMO1P63165 101 aaKnown RBP3.78□□□□□ -1.8
PTAR1-202ENST00000377200 ZNF550Q7Z398 422 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms