RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 IFT52Q9Y366 437 aa13.79□□□□□ -0.2
SDHB-201ENST00000375499 NSD1Q96L73 2696 aaPredicted RBP13.79□□□□□ -0.2
SDHB-201ENST00000375499 CSPG4Q6UVK1 2322 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 LIPT2A6NK58 231 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 TMEM229AB2RXF0 380 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 C5orf58C9J3I9 102 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 FBP2O00757 339 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 DNPH1O43598 174 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 HEXAP06865 529 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 UQCRBP14927 111 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 PPP3CBP16298 524 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 COX5AP20674 150 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 PPIBP23284 216 aaKnown RBP13.78□□□□□ -0.2
SDHB-201ENST00000375499 SLC16A1P53985 500 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 GUCY1A3Q02108 690 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 CEACAM7Q14002 265 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 SCARB2Q14108 478 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 PDK3Q15120 406 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 TAB1Q15750 504 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 ALKBH2Q6NS38 261 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 CLEC9AQ6UXN8 241 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 Q6ZT83 130 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 PIGXQ8TBF5 258 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 ZHX1-C8orf76Q96EF9 292 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 PLPPR2Q96GM1 343 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 CGREF1Q99674 301 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 PRR14Q9BWN1 585 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 OR10A4Q9H209 315 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 RABEP2Q9H5N1 569 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 UBTD1Q9HAC8 227 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 TRAPPC4Q9Y296 219 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 NDUFAF1Q9Y375 327 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 RTTNQ86VV8 2226 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 ARID1AO14497 2285 aa13.78□□□□□ -0.2
SDHB-201ENST00000375499 NPIPB7O75200 414 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 AKR7A3O95154 331 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 IL32P24001 234 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 CXCR1P25024 350 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 PRKAR1BP31321 381 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 P2RY4P51582 365 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 SLC35A1P78382 337 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 EGR4Q05215 589 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 DMTNQ08495 405 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 ITGADQ13349 1161 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 CAPRIN1Q14444 709 aaKnown RBP13.77□□□□□ -0.21
SDHB-201ENST00000375499 OR7A5Q15622 319 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 BEX5Q5H9J7 111 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 REEP3Q6NUK4 255 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 DHRS4L2Q6PKH6 230 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 BHLHA15Q7RTS1 189 aaPredicted RBP13.77□□□□□ -0.21
SDHB-201ENST00000375499 TMEM99Q8N816 258 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 STEAP2Q8NFT2 490 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 KISS1RQ969F8 398 aaPredicted RBP13.77□□□□□ -0.21
SDHB-201ENST00000375499 ANKRD27Q96NW4 1050 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 SIKE1Q9BRV8 207 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 PTDSS2Q9BVG9 487 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 BEX4Q9NWD9 120 aaPredicted RBP13.77□□□□□ -0.21
SDHB-201ENST00000375499 EMC3Q9P0I2 261 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 ZNF232Q9UNY5 417 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 TRIM33Q9UPN9 1127 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 NOSIPQ9Y314 301 aaKnown RBP13.77□□□□□ -0.21
SDHB-201ENST00000375499 FLVCR1Q9Y5Y0 555 aa13.77□□□□□ -0.21
SDHB-201ENST00000375499 ANGPT2O15123 496 aa13.76□□□□□ -0.21
SDHB-201ENST00000375499 ARHGEF9O43307 516 aa13.76□□□□□ -0.21
SDHB-201ENST00000375499 TPST2O60704 377 aa13.76□□□□□ -0.21
SDHB-201ENST00000375499 FKBP2P26885 142 aaKnown RBP13.76□□□□□ -0.21
SDHB-201ENST00000375499 IDUAP35475 653 aa13.76□□□□□ -0.21
SDHB-201ENST00000375499 COPZ1P61923 177 aa13.76□□□□□ -0.21
SDHB-201ENST00000375499 SLC17A1Q14916 467 aa13.76□□□□□ -0.21
SDHB-201ENST00000375499 PAQR6Q6TCH4 344 aa13.76□□□□□ -0.21
SDHB-201ENST00000375499 ZNF100Q8IYN0 542 aa13.76□□□□□ -0.21
SDHB-201ENST00000375499 WFDC11Q8NEX6 87 aa13.76□□□□□ -0.21
SDHB-201ENST00000375499 POTEKPQ9BYX7 375 aa13.76□□□□□ -0.21
SDHB-201ENST00000375499 CACYBPQ9HB71 228 aaKnown RBP13.76□□□□□ -0.21
SDHB-201ENST00000375499 FANCFQ9NPI8 374 aa13.76□□□□□ -0.21
SDHB-201ENST00000375499 USF3Q68DE3 2245 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 A0A1B0GWA3 101 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 EVPLLA8MZ36 301 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 FXYD1O00168 92 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 OPN1SWP03999 348 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 PTNP21246 168 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 PCBP3P57721 371 aaKnown RBP13.75□□□□□ -0.21
SDHB-201ENST00000375499 NFYCQ13952 458 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 P2RY6Q15077 328 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 ACKR1Q16570 336 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 ZSWIM7Q19AV6 140 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 OTUD3Q5T2D3 398 aaPredicted RBP13.75□□□□□ -0.21
SDHB-201ENST00000375499 C1orf140Q5VVS0 124 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 FBXW9Q5XUX1 488 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 CASP12Q6UXS9 341 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 ZNF704Q6ZNC4 412 aaPredicted RBP13.75□□□□□ -0.21
SDHB-201ENST00000375499 NET1Q7Z628 596 aaPredicted RBP13.75□□□□□ -0.21
SDHB-201ENST00000375499 ZNF433Q8N7K0 673 aaPredicted RBP13.75□□□□□ -0.21
SDHB-201ENST00000375499 ZIC4Q8N9L1 334 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 SMYD1Q8NB12 490 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 HIPK4Q8NE63 616 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 OR52E4Q8NGH9 312 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 SLC35B4Q969S0 331 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 APH1AQ96BI3 265 aa13.75□□□□□ -0.21
SDHB-201ENST00000375499 ZNF385AQ96PM9 386 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms