RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ASF1AQ9Y294 204 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 CABIN1Q9Y6J0 2220 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 ABCA7Q8IZY2 2146 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 GNG14A0A1W2PPG7 69 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 C1orf196B1AJZ1 125 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 STX11O75558 287 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 REM1O75628 298 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 SERPIND1P05546 499 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 SAGP10523 405 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-203ENST00000375315 BLOC1S1P78537 153 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 SLC6A19Q695T7 634 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 FAM83HQ6ZRV2 1179 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-203ENST00000375315 PRSS45Q7RTY3 260 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 LINC00471Q8N535 108 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 FAM3CQ92520 227 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 PFDN5Q99471 154 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 AUNIPQ9H7T9 357 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 POLE3Q9NRF9 147 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 GHRLQ9UBU3 117 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 PLEKHA6Q9Y2H5 1048 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 MEX3AA1L020 520 aaKnown RBP11.23□□□□□ -0.61
C9orf3-203ENST00000375315 POM121BA6NF01 834 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 C5orf52A6NGY3 159 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 MBTPS2O43462 519 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 STATHP02808 62 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 FOSL2P15408 326 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 ANXA7P20073 488 aaKnown RBP11.23□□□□□ -0.61
C9orf3-203ENST00000375315 GSTM3P21266 225 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 MMP11P24347 488 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 HTR2AP28223 471 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 SOAT1P35610 550 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 DEFA6Q01524 100 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 LRRC56Q8IYG6 542 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-203ENST00000375315 EXOSC8Q96B26 276 aaKnown RBP11.23□□□□□ -0.61
C9orf3-203ENST00000375315 CXorf40BQ96DE9 158 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 MTERF1Q99551 399 aaKnown RBP11.23□□□□□ -0.61
C9orf3-203ENST00000375315 ADAT1Q9BUB4 502 aaKnown RBP11.23□□□□□ -0.61
C9orf3-203ENST00000375315 C8orf33Q9H7E9 229 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-203ENST00000375315 ABRACLQ9P1F3 81 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF629Q9UEG4 869 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-203ENST00000375315 NPFFR2Q9Y5X5 522 aa11.23□□□□□ -0.61
C9orf3-203ENST00000375315 A0A1W2PQF6 199 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 AKR7A3O95154 331 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 SLC16A8O95907 504 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 HEXAP06865 529 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF35P13682 527 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 IRF8Q02556 426 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 IRF4Q15306 451 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 EIF2S3LQ2VIR3 472 aaKnown RBP11.22□□□□□ -0.61
C9orf3-203ENST00000375315 SLC25A35Q3KQZ1 300 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 FAM76BQ5HYJ3 339 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 PRAMEF14Q5SWL7 426 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 H3F3CQ6NXT2 135 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 PODNL1Q6PEZ8 512 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 LINGO2Q7L985 606 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF547Q8IVP9 402 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF565Q8N9K5 539 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 OR5AK3PQ8NH89 298 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 APOBEC4Q8WW27 367 aaKnown RBP11.22□□□□□ -0.61
C9orf3-203ENST00000375315 PEX11GQ96HA9 241 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 FOXQ1Q9C009 403 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 TICRRQ7Z2Z1 1910 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 OR14I1A6ND48 311 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 TMEM200CA6NKL6 621 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 ARFIP1P53367 373 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 RBMS2Q15434 407 aaKnown RBP11.22□□□□□ -0.61
C9orf3-203ENST00000375315 APOOLQ6UXV4 268 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 NAA40Q86UY6 237 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 OR4K5Q8NGD3 323 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 CDX2Q99626 313 aaPredicted RBP11.22□□□□□ -0.61
C9orf3-203ENST00000375315 CYP8B1Q9UNU6 501 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 TTC28Q96AY4 2481 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 A0A0G2JK05 382 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 FOLR2P14207 255 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 NDUFV2P19404 249 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 PPM1FP49593 454 aaPredicted RBP11.22□□□□□ -0.61
C9orf3-203ENST00000375315 TRAM1Q15629 374 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 TEX30Q5JUR7 227 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 ZDHHC20Q5W0Z9 365 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 C18orf63Q68DL7 685 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 CEACAM19Q7Z692 300 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 NR4A3Q92570 626 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 OR1F2PQ96R84 312 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 TEX12Q9BXU0 123 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 XKR8Q9H6D3 395 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 MVB12BQ9H7P6 319 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 FBXL21Q9UKT6 434 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 CARHSP1Q9Y2V2 147 aaKnown RBP11.22□□□□□ -0.61
C9orf3-203ENST00000375315 OR10H1Q9Y4A9 318 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 DMRT1Q9Y5R6 373 aa11.22□□□□□ -0.61
C9orf3-203ENST00000375315 ARGFXA6NJG6 315 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 OR52A4PA6NMU1 304 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 TXNL1O43396 289 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 IGHA1P01876 353 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 RNF224P0DH78 156 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 SNRPBP14678 240 aaKnown RBP11.21□□□□□ -0.61
C9orf3-203ENST00000375315 C5AR1P21730 350 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 ART1P52961 327 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 EEF1A1P68104 462 aaKnown RBP11.21□□□□□ -0.61
C9orf3-203ENST00000375315 OC90Q02509 493 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms