RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 EFCAB7A8K855 629 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 DSCR3O14972 297 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 GPX5O75715 221 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 LYPD3O95274 346 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 HBQ1P09105 142 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 VAMP1P23763 118 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 ETV5P41161 510 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 GPR3P46089 330 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 RFX3P48380 749 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 GAS1P54826 345 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 FGFBP1Q14512 234 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 DNASE2BQ8WZ79 361 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 SLC7A6Q92536 515 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 BPIFA2Q96DR5 249 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 CNPPD1Q9BV87 410 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 JAM3Q9BX67 310 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 DPH1Q9BZG8 443 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 OR10A5Q9H207 317 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 SYNDIG1Q9H7V2 258 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 LRIT1Q9P2V4 623 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 CBLCQ9ULV8 474 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 GPR52Q9Y2T5 361 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 EYSQ5T1H1 3165 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 TMEM150CB9EJG8 249 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 NUDT21O43809 227 aaKnown RBP7.56□□□□□ -1.2
UBR4-202ENST00000375224 DUX1O43812 170 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 PAICSP22234 425 aaKnown RBP7.56□□□□□ -1.2
UBR4-202ENST00000375224 CD1CP29017 333 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 SSTR4P31391 388 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 ATP6V1E1P36543 226 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 AFF3P51826 1226 aaKnown RBP7.56□□□□□ -1.2
UBR4-202ENST00000375224 GFERP55789 205 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 HSD11B2P80365 405 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 MAT1AQ00266 395 aaKnown RBP7.56□□□□□ -1.2
UBR4-202ENST00000375224 TPBGQ13641 420 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 COTL1Q14019 142 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 ULK3Q6PHR2 472 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 CXXC5Q7LFL8 322 aaKnown RBP7.56□□□□□ -1.2
UBR4-202ENST00000375224 C1orf216Q8TAB5 229 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 CNOT9Q92600 299 aaKnown RBP7.56□□□□□ -1.2
UBR4-202ENST00000375224 OR1F2PQ96R84 312 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 CCNL2Q96S94 520 aaPredicted RBP7.56□□□□□ -1.2
UBR4-202ENST00000375224 ASPNQ9BXN1 380 aa7.56□□□□□ -1.2
UBR4-202ENST00000375224 SYNDIG1LA6NDD5 238 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 ARGFXA6NJG6 315 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 ZNF670-ZNF695F2Z2N8 137 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 WWP2O00308 870 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 CDC42EP2O14613 210 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 SLC30A4O14863 429 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 CH25HO95992 272 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 SAGP10523 405 aaPredicted RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 SOX3P41225 446 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 CRYBB2P43320 205 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 RORCP51449 518 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 GPR143P51810 404 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 MAP2K6P52564 334 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 BTG2P78543 158 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 POU4F3Q15319 338 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 SSX2Q16385 188 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.55□□□□□ -1.2
UBR4-202ENST00000375224 SMARCD3Q6STE5 483 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 HSDL2Q6YN16 418 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 KLHL36Q8N4N3 616 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 RCBTB1Q8NDN9 531 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 CLDN23Q96B33 292 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 TMEM68Q96MH6 324 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 SPRTNQ9H040 489 aaPredicted RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 CUTCQ9NTM9 273 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 DNAJB12Q9NXW2 375 aaKnown RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 MRTO4Q9UKD2 239 aaKnown RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 SLC35A3Q9Y2D2 325 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 GSTK1Q9Y2Q3 226 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 SPIN1Q9Y657 262 aaPredicted RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 CEP192Q8TEP8 1941 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 A0A1B0GWA3 101 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 NPIPB9F8W1W9 429 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 TGFBR3LH3BV60 316 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 BCAT2O15382 392 aaPredicted RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 AKR7A2O43488 359 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 CDC123O75794 336 aaPredicted RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 MAKP20794 623 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 CXCL12P48061 93 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 RAB13P51153 203 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 ERV3-1Q14264 604 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 PLK5Q496M5 336 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 ALG10BQ5I7T1 473 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 YOD1Q5VVQ6 348 aaPredicted RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 LIPKQ5VXJ0 399 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 POMZP3Q6PJE2 187 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 KMT5CQ86Y97 462 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 SLITRK4Q8IW52 837 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 OR52H1Q8NGJ2 320 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 C16orf52Q8NHV5 167 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 PDCD10Q9BUL8 212 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 DUSP15Q9H1R2 295 aaPredicted RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 BIN3Q9NQY0 253 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 RNF215Q9Y6U7 377 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 LOC110117498-PIK3R3F6TDL0 507 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 AKAP8O43823 692 aaKnown RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 IFNA7P01567 189 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms