RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ARHGEF39Q8N4T4 335 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 ATP6V1C2Q8NEY4 427 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 PEX11GQ96HA9 241 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 SLC7A5P2Q9GIP4 190 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 MIXL1Q9H2W2 232 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 TIGARQ9NQ88 270 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 CMC2Q9NRP2 79 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 DHCR7Q9UBM7 475 aaKnown RBP14.24□□□□□ -0.13
CCDC40-202ENST00000374876 SIGLEC7Q9Y286 467 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 TMEM184BQ9Y519 407 aaPredicted RBP14.24□□□□□ -0.13
CCDC40-202ENST00000374876 A0A1B0GWA3 101 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 PRR23D1E9PI22 279 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-202ENST00000374876 CDC123O75794 336 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-202ENST00000374876 PRR23D2P0DMB1 279 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-202ENST00000374876 IL7P13232 177 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 TMED10P49755 219 aaKnown RBP14.23□□□□□ -0.13
CCDC40-202ENST00000374876 EMDP50402 254 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 RPS7P62081 194 aaKnown RBP14.23□□□□□ -0.13
CCDC40-202ENST00000374876 BAK1Q16611 211 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 PRTGQ2VWP7 1150 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 FAM199XQ6PEV8 388 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-202ENST00000374876 XKRXQ6PP77 449 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 THSD4Q6ZMP0 1018 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 DTX1Q86Y01 620 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 ARIH2OSQ8N7S6 290 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 OR4N2Q8NGD1 307 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 OR51A7Q8NH64 312 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 PTCHD1Q96NR3 888 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 TRIM2Q9C040 744 aa14.23□□□□□ -0.13
CCDC40-202ENST00000374876 MEPEQ9NQ76 525 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-202ENST00000374876 SEC16AO15027 2179 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 TRAV27A0A087WT01 109 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 ZC3H12DA2A288 527 aaKnown RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 SLC22A31A6NKX4 558 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 RIIAD1A6NNX1 92 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 GABRPO00591 440 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 SSX4O60224 188 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 CTNSO60931 367 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 ALAS2P22557 587 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 SSTR4P31391 388 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 EIF2S3P41091 472 aaKnown RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 SLC16A1P53985 500 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 CAV3P56539 151 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 GLYR1Q49A26 553 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 C1orf189Q5VU69 101 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 C6orf15Q6UXA7 325 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 GRAMD2AQ8IUY3 354 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 ZNF595Q8IYB9 648 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 CELF2-AS1Q8N7Q2 184 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 SLC37A3Q8NCC5 494 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 ZNF248Q8NDW4 579 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 SNIP1Q8TAD8 396 aaKnown RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 NEIL3Q8TAT5 605 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 KCNE4Q8WWG9 221 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 NKD1Q969G9 470 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 ZNF285Q96NJ3 590 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 TBX5Q99593 518 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 ALG8Q9BVK2 526 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 HCAR1Q9BXC0 346 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 ISG20L2Q9H9L3 353 aaKnown RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 ASB6Q9NWX5 421 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 DNAJB12Q9NXW2 375 aaKnown RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 FLRT3Q9NZU0 649 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 DAPL1A0PJW8 107 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 HRKO00198 91 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 CLDN4O14493 209 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 RAD1O60671 282 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 TMCC2O75069 709 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 CPNE3O75131 537 aaKnown RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 IGKV1D-16P01601 117 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 GUSBP08236 651 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 LIPCP11150 499 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 CD82P27701 267 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 MAT1AQ00266 395 aaKnown RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 BDH1Q02338 343 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 SCN1BQ07699 218 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 SELENBP1Q13228 472 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 SRSF6Q13247 344 aaKnown RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 CLN3Q13286 438 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 ALG10BQ5I7T1 473 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 TCTE1Q5JU00 501 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 FCRLBQ6BAA4 426 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 LCN10Q6JVE6 187 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 TTLL10Q6ZVT0 673 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 SPATC1Q76KD6 591 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 NRARPQ7Z6K4 114 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 OAFQ86UD1 273 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 KDF1Q8NAX2 398 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 NLGN4YQ8NFZ3 816 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 OR10H4Q8NGA5 316 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 VSTM2LQ96N03 204 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 DGAT2Q96PD7 388 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 DCLRE1CQ96SD1 692 aaKnown RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 PRTFDC1Q9NRG1 225 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-202ENST00000374876 BABAM2Q9NXR7 383 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 POLHQ9Y253 713 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 SLC35A3Q9Y2D2 325 aa14.22□□□□□ -0.13
CCDC40-202ENST00000374876 BLACEA4D250 179 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 CD8B2A6NJW9 211 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms