RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 DMWDQ09019 674 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 SNTB2Q13425 540 aaKnown RBP6.87□□□□□ -1.31
GARNL3-202ENST00000373387 FGFBP1Q14512 234 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 GPR68Q15743 365 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 TP53I3Q53FA7 332 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 KLHL12Q53G59 568 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 ZNF626Q68DY1 528 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 CDRT4Q8N9R6 151 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 NPEPL1Q8NDH3 523 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 OR6C4Q8NGE1 309 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 RSC1A1Q92681 617 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 TNFRSF13CQ96RJ3 184 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 FLVCR2Q9UPI3 526 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 MED31Q9Y3C7 131 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 XIRP2A4UGR9 3374 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 CEP290O15078 2479 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 NPIPA5A0A0B4J1W7 369 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 NPIPA7E9PJI5 369 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 SULT1B1O43704 296 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 ARL6IP5O75915 188 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 AK1P00568 194 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 GYPBP06028 91 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 NPIPA8P0DM63 369 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 ACRP10323 421 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 CCL5P13501 91 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 HIST1H1CP16403 213 aaKnown RBP6.87□□□□□ -1.31
GARNL3-202ENST00000373387 NANOS3P60323 173 aaKnown RBP6.87□□□□□ -1.31
GARNL3-202ENST00000373387 TAGLNQ01995 201 aaKnown RBP6.87□□□□□ -1.31
GARNL3-202ENST00000373387 CST6Q15828 149 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 RGS7BPQ6MZT1 257 aaPredicted RBP6.87□□□□□ -1.31
GARNL3-202ENST00000373387 PWWP2BQ6NUJ5 590 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 CYB561A3Q8NBI2 242 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 CEP76Q8TAP6 659 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 THEM6Q8WUY1 208 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 POF1BQ8WVV4 589 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 NACC2Q96BF6 587 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 MYADMQ96S97 322 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 LMF2Q9BU23 707 aaKnown RBP6.87□□□□□ -1.31
GARNL3-202ENST00000373387 GSX2Q9BZM3 304 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 ZDHHC4Q9NPG8 344 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 MGAT4CQ9UBM8 478 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 PCDHGA5Q9Y5G8 931 aa6.87□□□□□ -1.31
GARNL3-202ENST00000373387 A0A1B0GWA3 101 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 GXYLT2A0PJZ3 443 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 RIIAD1A6NNX1 92 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 C5orf67F2Z3F1 127 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 FGF17O60258 216 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 GPRIN2O60269 458 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 IGKV1D-16P01601 117 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 IL5P05113 134 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 HOXC4P09017 264 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 SRMP19623 302 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 PSMB1P20618 241 aaKnown RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 DIO1P49895 249 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 EMDP50402 254 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 GBX2P52951 348 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 VSX2P58304 361 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 RPL6Q02878 288 aaKnown RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 DGAT2L6Q6ZPD8 337 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 SLC36A1Q7Z2H8 476 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 OR52I2Q8NH67 350 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 ARMC5Q96C12 935 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 WDR89Q96FK6 387 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 CCDC120Q96HB5 630 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 OR51V1Q9H2C8 321 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 METTL17Q9H7H0 456 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 MRPS2Q9Y399 296 aaKnown RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 A0A087WV48 116 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 TRBV5-5A0A0J9YX44 114 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 C10orf142B7Z368 130 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 PLRG1O43660 514 aaKnown RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 ABHD16AO95870 558 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 CBX7O95931 251 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 GIPP09681 153 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 ZP3P21754 424 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 ZNF81P51508 661 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 BLVRAP53004 296 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 ILF3Q12906 894 aaKnown RBP eCLIP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 TJAP1Q5JTD0 557 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 SLC35D3Q5M8T2 416 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 PRSS42Q7Z5A4 293 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 LRRTM1Q86UE6 522 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 OR4N5Q8IXE1 308 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 SLC35F2Q8IXU6 374 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 OR6V1Q8N148 313 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 LRRC75AQ8NAA5 344 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 ZPLD1Q8TCW7 415 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 SUSD6Q92537 303 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 CNOT9Q92600 299 aaKnown RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 NSMAFQ92636 917 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 ANKRD9Q96BM1 317 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 CNN2Q99439 309 aaKnown RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 CDCP1Q9H5V8 836 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 BRD7Q9NPI1 651 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 PHPT1Q9NRX4 125 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-202ENST00000373387 OBP2AQ9NY56 170 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 TAS2R5Q9NYW4 299 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 NCDNQ9UBB6 729 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 TBC1D29Q9UFV1 150 aa6.86□□□□□ -1.31
GARNL3-202ENST00000373387 RCE1Q9Y256 329 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms