RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 MRPS18AQ9NVS2 196 aaKnown RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SPG21Q9NZD8 308 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 GNG8Q9UK08 70 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 FBXL3Q9UKT7 428 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 CA5BQ9Y2D0 317 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ADAM18Q9Y3Q7 739 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 PLEKHM1Q9Y4G2 1056 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 FRYLO94915 3013 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF860A6NHJ4 632 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 FOXE1O00358 373 aaPredicted RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 BET1O15155 118 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SLC16A5O15375 505 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 GALR3O60755 368 aaPredicted RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SDC3O75056 442 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 RASGRP1O95267 797 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ELFN1P0C7U0 828 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SAGP10523 405 aaPredicted RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 GABRA1P14867 456 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ST6GAL1P15907 406 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 CDK2P24941 298 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 MSX1P28360 303 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 S100A11P31949 105 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 CCR2P41597 374 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 FLT3LGP49771 235 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 GSK3AP49840 483 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 GPR85P60893 370 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SEC61A1P61619 476 aaKnown RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 RPS11P62280 158 aaKnown RBP eCLIP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 MC2RQ01718 297 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 PRKCZQ05513 592 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 FAM199XQ6PEV8 388 aaPredicted RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ZCCHC12Q6PEW1 402 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 LRRN1Q6UXK5 716 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 MEPCEQ7L2J0 689 aaKnown RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ZAR1Q86SH2 424 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 BIVMQ86UB2 503 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 FAM129CQ86XR2 697 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 MUC20Q8N307 709 aaPredicted RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 OR10K1Q8NGX5 313 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 OR52N1Q8NH53 320 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 PIGXQ8TBF5 258 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 FANK1Q8TC84 345 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 PHOSPHO2Q8TCD6 241 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 DUSP19Q8WTR2 217 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 THEM6Q8WUY1 208 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 TCEAL4Q96EI5 215 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 CHFRQ96EP1 664 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SLC35A4Q96G79 324 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 LYSMD1Q96S90 227 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 EFCAB11Q9BUY7 163 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SGPP1Q9BX95 441 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ZDHHC5Q9C0B5 715 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ZCCHC2Q9C0B9 1178 aaKnown RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ANKRD19PQ9H560 264 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 LDAHQ9H6V9 325 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ADGRL4Q9HBW9 690 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 TRIM36Q9NQ86 728 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 C2orf42Q9NWW7 574 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ASB6Q9NWX5 421 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 MARK1Q9P0L2 795 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 LRFN2Q9ULH4 789 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 EXOGQ9Y2C4 368 aaKnown RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 DOCK9Q9BZ29 2069 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SCN10AQ9Y5Y9 1956 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TRBV23OR9-2A0A075B6M9 112 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TRAV20A0A0B4J274 112 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 IGKV1-8A0A0C4DH67 115 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 OR6C76A6NM76 312 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TMEM189-UBE2V1I3L0A0 370 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 SULT1C2O00338 296 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 NDUFS4O43181 175 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 ERI3O43414 337 aaKnown RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 GMFGO60234 142 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PTP4A3O75365 173 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 UBL3O95164 117 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 NFATC1O95644 943 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 MAS1P04201 325 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 HMGN1P05114 100 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 CLTBP09497 229 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 CYBAP13498 195 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 ADCYAP1P18509 176 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PRLHRP49683 370 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 GDI2P50395 445 aaKnown RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 MMP15P51511 669 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 NANOS3P60323 173 aaKnown RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TNFRSF17Q02223 184 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 SSPNQ14714 243 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TRAM2Q15035 370 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 OR7A5Q15622 319 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 HFEQ30201 348 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 NDUFAF6Q330K2 333 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TMEM95Q3KNT9 176 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 FNDC3BQ53EP0 1204 aaKnown RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 SLC25A30Q5SVS4 291 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 FAM69AQ5T7M9 428 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 C11orf88Q6PI97 169 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 FIGNL1Q6PIW4 674 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 GSG1LQ6UXU4 331 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 UNQ6126/PRO20091Q6UXV3 157 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 CD300LDQ6UXZ3 194 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms