RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ZNF888P0CJ79 500 aaPredicted RBP12.52□□□□□ -0.41
PRKN-205ENST00000366897 TMIGD3P0DMS9 266 aaPredicted RBP12.52□□□□□ -0.41
PRKN-205ENST00000366897 PEBP1P30086 187 aaKnown RBP12.52□□□□□ -0.41
PRKN-205ENST00000366897 ARHGDIBP52566 201 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 CDK5R1Q15078 307 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 HNRNPA1L2Q32P51 320 aaKnown RBP12.52□□□□□ -0.41
PRKN-205ENST00000366897 DEFB134Q4QY38 66 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 HSD17B12Q53GQ0 312 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 MTSS1LQ765P7 747 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 ASPGQ86U10 573 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 DNAAF1Q8NEP3 725 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 LHFPL5Q8TAF8 219 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 SNX33Q8WV41 574 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 RSPRY1Q96DX4 576 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 CDX2Q99626 313 aaPredicted RBP12.52□□□□□ -0.41
PRKN-205ENST00000366897 NKX3-1Q99801 234 aaPredicted RBP12.52□□□□□ -0.41
PRKN-205ENST00000366897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.52□□□□□ -0.41
PRKN-205ENST00000366897 NTMQ9P121 344 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 COPS3Q9UNS2 423 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 NPTNQ9Y639 398 aa12.52□□□□□ -0.41
PRKN-205ENST00000366897 SMAD9O15198 467 aaKnown RBP12.51□□□□□ -0.41
PRKN-205ENST00000366897 SELENOFO60613 162 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 ADAM11O75078 769 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 LDB3O75112 727 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 ATP1B1P05026 303 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 SLC2A5P22732 501 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 MAT2AP31153 395 aaKnown RBP12.51□□□□□ -0.41
PRKN-205ENST00000366897 PLA2G7Q13093 441 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 EXOSC7Q15024 291 aaKnown RBP12.51□□□□□ -0.41
PRKN-205ENST00000366897 PRAMEF8Q5VWM4 474 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 PRAMEF7Q5VXH5 474 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 HEPHL1Q6MZM0 1159 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 FAM199XQ6PEV8 388 aaPredicted RBP12.51□□□□□ -0.41
PRKN-205ENST00000366897 OR2L3Q8NG85 312 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 OR5M1Q8NGP8 315 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 GINS4Q9BRT9 223 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 TSPAN10Q9H1Z9 355 aaPredicted RBP12.51□□□□□ -0.41
PRKN-205ENST00000366897 GON4LQ3T8J9 2241 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 FXYD6-FXYD2A0A087WZ82 144 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 CARNS1A5YM72 827 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 STX11O75558 287 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 RCBTB2O95199 551 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 ADH1AP07327 375 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 NGFRP08138 427 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 NMBP08949 121 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 ZNF3P17036 446 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 CEBPBP17676 345 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 SOX2P48431 317 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 PLAURQ03405 335 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 ZNF234Q14588 700 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 ZNF765Q7L2R6 523 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 ESX1Q8N693 406 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 OR6K6Q8NGW6 343 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 MS4A4EQ96PG1 132 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 FXYD6Q9H0Q3 95 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 KRCC1Q9NPI7 259 aaPredicted RBP12.51□□□□□ -0.41
PRKN-205ENST00000366897 ABRACLQ9P1F3 81 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 FBXL2Q9UKC9 423 aa12.51□□□□□ -0.41
PRKN-205ENST00000366897 PTPRSQ13332 1948 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 PLSCR5A0PG75 271 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 SLC22A23A1A5C7 686 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 LRRC72A6NJI9 287 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 RPP14O95059 124 aaKnown RBP12.5□□□□□ -0.41
PRKN-205ENST00000366897 LYPD3O95274 346 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 HIST1H1CP16403 213 aaKnown RBP12.5□□□□□ -0.41
PRKN-205ENST00000366897 HSD17B2P37059 387 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 TAS2R43P59537 309 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 SIRPAP78324 504 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 ELAVL3Q14576 367 aaKnown RBP12.5□□□□□ -0.41
PRKN-205ENST00000366897 HACD4Q5VWC8 232 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 NRROSQ86YC3 692 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 LRRC25Q8N386 305 aaPredicted RBP12.5□□□□□ -0.41
PRKN-205ENST00000366897 OR4E2Q8NGC2 313 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 C1orf216Q8TAB5 229 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 ZPLD1Q8TCW7 415 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 NR4A3Q92570 626 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 MOAP1Q96BY2 351 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 SMIM19Q96E16 107 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 LIN7BQ9HAP6 207 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 NPDC1Q9NQX5 325 aaPredicted RBP12.5□□□□□ -0.41
PRKN-205ENST00000366897 MED31Q9Y3C7 131 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 GXYLT2A0PJZ3 443 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 MEIS3P1A6NDR6 274 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 MFSD2BA6NFX1 497 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 NFYAP23511 347 aaPredicted RBP12.5□□□□□ -0.41
PRKN-205ENST00000366897 IKZF1Q13422 519 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 DYRK1AQ13627 763 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 ATRAIDQ6UW56 229 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 SPRED2Q7Z698 418 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 CMIPQ8IY22 773 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 CDK20Q8IZL9 346 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 C10orf90Q96M02 699 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 ACTR6Q9GZN1 396 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 C2orf42Q9NWW7 574 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 RNF215Q9Y6U7 377 aa12.5□□□□□ -0.41
PRKN-205ENST00000366897 ANXA2P2A6NMY6 339 aa12.49□□□□□ -0.41
PRKN-205ENST00000366897 MCRIP1C9JLW8 97 aa12.49□□□□□ -0.41
PRKN-205ENST00000366897 ARL6IP5O75915 188 aa12.49□□□□□ -0.41
PRKN-205ENST00000366897 MAZP56270 477 aaKnown RBP12.49□□□□□ -0.41
PRKN-205ENST00000366897 ODF4Q2M2E3 257 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms