RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 HTR2AP28223 471 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 CST5P28325 142 aaPredicted RBP12.89□□□□□ -0.35
COL6A1-201ENST00000361866 AGERQ15109 404 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.89□□□□□ -0.35
COL6A1-201ENST00000361866 SLC48A1Q6P1K1 146 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 DPY19L4Q7Z388 723 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 ADIPOR2Q86V24 386 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 GAL3ST3Q96A11 431 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 DERL3Q96Q80 235 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 NPIPA1Q9UND3 350 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 NAP1L6A6NFF2 107 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 C2orf74A8MZ97 194 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 PLA2G10O15496 165 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 BTG1P62324 171 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 OR7E24Q6IFN5 339 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 FAM122CQ6P4D5 195 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 GSG1LQ6UXU4 331 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 SIRT6Q8N6T7 355 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 OR51D1Q8NGF3 324 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 NXPE3Q969Y0 559 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 ALG14Q96F25 216 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 SLC35A4Q96G79 324 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 WDR92Q96MX6 357 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 BTBD2Q9BX70 525 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 MIXL1Q9H2W2 232 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 IL21Q9HBE4 155 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 POLE3Q9NRF9 147 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 SCN3AQ9NY46 2000 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 SYT5O00445 386 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 TOR1AO14656 332 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 AGTR1P30556 359 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 ERVFC1P60507 584 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 TRA2BP62995 288 aaKnown RBP12.88□□□□□ -0.35
COL6A1-201ENST00000361866 REEP5Q00765 189 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 C12orf73Q69YU5 71 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 MFSD12Q6NUT3 480 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 STX12Q86Y82 276 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 TMIEQ8NEW7 156 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 G6PC3Q9BUM1 346 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 HCAR1Q9BXC0 346 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 ACOXLQ9NUZ1 547 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 SPHK1Q9NYA1 384 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 CDC14CA4D256 554 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 PRKNO60260 465 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-201ENST00000361866 SELENOFO60613 162 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 CTSLP07711 333 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 EPHA5P54756 1037 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 ACTBP60709 375 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 ACTG1P63261 375 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 SPOCK1Q08629 439 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 ZBTB37Q5TC79 503 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 C17orf107Q6ZR85 190 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 TCTE3Q8IZS6 198 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 ZSCAN1Q8NBB4 408 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 SFXN5Q8TD22 340 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 CD300LFQ8TDQ1 290 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 JSRP1Q96MG2 331 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-201ENST00000361866 C7orf50Q9BRJ6 194 aaKnown RBP12.88□□□□□ -0.35
COL6A1-201ENST00000361866 NARFLQ9H6Q4 476 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 NRIP3Q9NQ35 241 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 KLK11Q9UBX7 282 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF281Q9Y2X9 895 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 THSD7AQ9UPZ6 1657 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 RNH1P13489 461 aaKnown RBP12.88□□□□□ -0.35
COL6A1-201ENST00000361866 DLSTP36957 453 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 MAPK14Q16539 360 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 EIF5AL1Q6IS14 154 aaKnown RBP12.88□□□□□ -0.35
COL6A1-201ENST00000361866 TMEM150AQ86TG1 271 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 SMARCD2Q92925 531 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 BADQ92934 168 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 RASD2Q96D21 266 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 TMEM168Q9H0V1 697 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 GPATCH2Q9NW75 528 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 CAMK2AQ9UQM7 478 aa12.88□□□□□ -0.35
COL6A1-201ENST00000361866 RHPN2P1A8MT19 583 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF736B4DX44 427 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-201ENST00000361866 WRBO00258 174 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 MAOBP27338 520 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 RUNX3Q13761 415 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 RPL22L1Q6P5R6 122 aaKnown RBP12.87□□□□□ -0.35
COL6A1-201ENST00000361866 C12orf45Q8N5I9 185 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-201ENST00000361866 OR9A4Q8NGU2 314 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 OR10K1Q8NGX5 313 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 SLC25A44Q96H78 314 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-201ENST00000361866 DOCK1Q14185 1865 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 AK1P00568 194 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 EGFP01133 1207 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 H2BFMP0C1H6 154 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 RIDAP52758 137 aaKnown RBP12.87□□□□□ -0.35
COL6A1-201ENST00000361866 HMGA2P52926 109 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 MVDP53602 400 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF836Q6ZNA1 936 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 RELL2Q8NC24 303 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-201ENST00000361866 ZBTB44Q8NCP5 570 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 OR4D11Q8NGI4 311 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 OR4Q3Q8NH05 313 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 ALG12Q9BV10 488 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 C1QTNF6Q9BXI9 259 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF700Q9H0M5 742 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 SAGE1Q9NXZ1 904 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms