RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 DUSP8Q13202 625 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 ERV3-1Q14264 604 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 AMZ1Q400G9 498 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 ZNF542PQ5EBM4 170 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 SFRP5Q5T4F7 317 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 GARNL3Q5VVW2 1013 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 SLC25A25Q6KCM7 469 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 FCRLAQ7L513 359 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 NLRC3Q7RTR2 1065 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 ZNF619Q8N2I2 560 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 OR11G2Q8NGC1 345 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 ZNF350Q9GZX5 532 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 TMEM168Q9H0V1 697 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 C20orf85Q9H1P6 137 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 CACYBPQ9HB71 228 aaKnown RBP9.73□□□□□ -0.85
SMC3-201ENST00000361804 DAPP1Q9UN19 280 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 TDRD6O60522 2096 aaKnown RBP9.73□□□□□ -0.85
SMC3-201ENST00000361804 RPS10-NUDT3A0A1W2PQS6 291 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 SLC22A31A6NKX4 558 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 ARPC1BO15143 372 aaKnown RBP9.73□□□□□ -0.85
SMC3-201ENST00000361804 GPANK1O95872 356 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 IGKV1D-16P01601 117 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 PDGFAP04085 211 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 NANOS3P60323 173 aaKnown RBP9.73□□□□□ -0.85
SMC3-201ENST00000361804 RGS1Q08116 209 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 MELKQ14680 651 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 CEBPEQ15744 281 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 PRRT3Q5FWE3 981 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 ENPP7Q6UWV6 458 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 OR1E3Q8WZA6 343 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 MOAP1Q96BY2 351 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 FOXN4Q96NZ1 517 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 ANKRD19PQ9H560 264 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 SLC35A3Q9Y2D2 325 aa9.73□□□□□ -0.85
SMC3-201ENST00000361804 SEC16AO15027 2179 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 CNTRLQ7Z7A1 2325 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 H7C1C5 153 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 STX11O75558 287 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 ALDOBP05062 364 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 CFL1P23528 166 aaKnown RBP9.72□□□□□ -0.85
SMC3-201ENST00000361804 DCTDP32321 178 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 KIR2DL1P43626 348 aaPredicted RBP9.72□□□□□ -0.85
SMC3-201ENST00000361804 LCN6P62502 163 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 SNTA1Q13424 505 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 GJD3Q8N144 294 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 ZNF511Q8NB15 262 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 FLVCR1-AS1Q8TAF5 88 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 GAL3ST1Q99999 423 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 KLHDC3Q9BQ90 382 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 SLC17A9Q9BYT1 436 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 SRMSQ9H3Y6 488 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 THAP10Q9P2Z0 257 aaPredicted RBP9.72□□□□□ -0.85
SMC3-201ENST00000361804 ING1Q9UK53 422 aaPredicted RBP9.72□□□□□ -0.85
SMC3-201ENST00000361804 DUXAA6NLW8 204 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 C17orf51A8MQB3 221 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 FLRT2O43155 660 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 TPOP07202 933 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 HNRNPA1P09651 372 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMC3-201ENST00000361804 KLF9Q13886 244 aaPredicted RBP9.72□□□□□ -0.85
SMC3-201ENST00000361804 UXS1Q8NBZ7 420 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 SNX33Q8WV41 574 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 LMF1Q96S06 567 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 B3GNT2Q9NY97 397 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 SPATA2Q9UM82 520 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 NUBP2Q9Y5Y2 271 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 RAD1O60671 282 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 ZNF3P17036 446 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 ACTR1BP42025 376 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 ACTR1AP61163 376 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 ERVK-25P63136 954 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 PDGFRLQ15198 375 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 PRAMEF8Q5VWM4 474 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 PRAMEF7Q5VXH5 474 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 OR2A5Q96R48 311 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 PBX4Q9BYU1 374 aa9.72□□□□□ -0.85
SMC3-201ENST00000361804 OR6C74A6NCV1 312 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 H0YC42 278 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 PTP4A3O75365 173 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 SLC35G6P0C7Q6 338 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 PTBP1P26599 531 aaKnown RBP eCLIP9.71□□□□□ -0.85
SMC3-201ENST00000361804 RPL4P36578 427 aaKnown RBP9.71□□□□□ -0.85
SMC3-201ENST00000361804 BLVRAP53004 296 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 PUDPQ08623 228 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 GRK1Q15835 563 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 ALG10BQ5I7T1 473 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 TMEM65Q6PI78 240 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 APOOLQ6UXV4 268 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 LUZP2Q86TE4 346 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 RPLP0P6Q8NHW5 317 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 GAL3ST3Q96A11 431 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 SLC25A38Q96DW6 304 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 APOOQ9BUR5 198 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 PITHD1Q9GZP4 211 aaPredicted RBP9.71□□□□□ -0.85
SMC3-201ENST00000361804 MS4A7Q9GZW8 240 aaPredicted RBP9.71□□□□□ -0.85
SMC3-201ENST00000361804 NANSQ9NR45 359 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 NUPL2O15504 423 aaKnown RBP9.71□□□□□ -0.85
SMC3-201ENST00000361804 UBL3O95164 117 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 RCBTB2O95199 551 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 NRG3P56975 720 aa9.71□□□□□ -0.85
SMC3-201ENST00000361804 TSPAN5P62079 268 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms