RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 FAM96BQ9Y3D0 163 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 CSNK1G3Q9Y6M4 447 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 PHLPP1O60346 1717 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 UBR2Q8IWV8 1755 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 CHEK1O14757 476 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 CSN1S1P47710 185 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 LTBQ06643 244 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 TMEM244Q5VVB8 128 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 SBSNQ6UWP8 590 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 CDHR3Q6ZTQ4 885 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 SLC35B4Q969S0 331 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 FBXW5Q969U6 566 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 EHFQ9NZC4 300 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 ENPP4Q9Y6X5 453 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 XKRY2A2RUG3 117 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 H7BY64 318 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 OR13C7P0DN81 318 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 OR4C11Q6IEV9 310 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 BPIFB2Q8N4F0 458 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 AKR7LQ8NHP1 331 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 PRAP1Q96NZ9 151 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 DCLRE1CQ96SD1 692 aaKnown RBP12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 INPP5KQ9BT40 448 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 KATNB1Q9BVA0 655 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 RIPK3Q9Y572 518 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 PPP5D1E7EU14 171 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 THBS1P07996 1170 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 SLC35E2BP0CK96 405 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 C21orf33P30042 268 aaPredicted RBP12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 CXCR4P61073 352 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 MLLT11Q13015 90 aaPredicted RBP12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 ZMYND19Q96E35 227 aaPredicted RBP12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 SGIP1Q9BQI5 828 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 ANKRD19PQ9H560 264 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 CNIH4Q9P003 139 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 MDC1Q14676 2089 aaKnown RBP12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 KIAA0355O15063 1070 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 CDC123O75794 336 aaPredicted RBP12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 NDUFB2O95178 105 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 SOD2P04179 222 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 RAB40ALP0C0E4 278 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 TMEM130Q8N3G9 435 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 RAB40AQ8WXH6 277 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 SPHK1Q9NYA1 384 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 ELK1P19419 428 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 SRYQ05066 204 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 GALNT2Q10471 571 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 PAGE3Q5JUK9 113 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 OR8U1Q8NH10 309 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 ADAMTS14Q8WXS8 1223 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 BOD1Q96IK1 185 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 NAA50Q9GZZ1 169 aaKnown RBP12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 SAP130Q9H0E3 1048 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 RYDENQ9NUL5 291 aaKnown RBP12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 DMAC2Q9NW81 257 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 BCL9LQ86UU0 1499 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 FCER1GP30273 86 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 OR2B8PP59922 312 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 PRR22Q8IZ63 422 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 NPRL2Q8WTW4 380 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 ECHDC3Q96DC8 303 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 SEC22AQ96IW7 307 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 LRFN5Q96NI6 719 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 FAM171A2A8MVW0 826 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 PRAMEF11O60813 436 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 S1PR4O95977 384 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 TRAPPC2P0DI81 140 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 TRAPPC2BP0DI82 140 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 MAOBP27338 520 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 TAS2R38P59533 333 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 SLC22A6Q4U2R8 563 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 CPXM2Q8N436 756 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 OR5M8Q8NGP6 311 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 SCPEP1Q9HB40 452 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 ARNT2Q9HBZ2 717 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 CRYM-AS1A6NIL9 109 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 SPI1P17947 270 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 ACVRL1P37023 503 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 CSNK1A1P48729 337 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 RAB7AP51149 207 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 TNFRSF17Q02223 184 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 CRMP1Q14194 572 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 OR2T27Q8NH04 317 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 INTS12Q96CB8 462 aaKnown RBP12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 SLC30A3Q99726 388 aa12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 CNOT2Q9NZN8 540 aaKnown RBP12.38□□□□□ -0.43
SRGAP3-201ENST00000360413 GLTPD2A6NH11 291 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 E7ESA3 106 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 I6L893 689 aaPredicted RBP12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 GABRPO00591 440 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 SEC14L5O43304 696 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 ABOP16442 354 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 TRHRP34981 398 aaPredicted RBP12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 ATRXP46100 2492 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 LGALS4P56470 323 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 OR6V1Q8N148 313 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 NDFIP1Q9BT67 221 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 C20orf85Q9H1P6 137 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 CACNG4Q9UBN1 327 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 PGAP2Q9UHJ9 254 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms