RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 OR6V1Q8N148 313 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 SCARB1Q8WTV0 552 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM239Q8WW34 195 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM18Q96B42 140 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 C1QTNF2Q9BXJ5 285 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 DCAF13Q9NV06 445 aaKnown RBP8.71□□□□□ -1.01
VPS13A-203ENST00000360280 RIMS3Q9UJD0 308 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 ICMTO60725 284 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 GPM6BQ13491 265 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 TESK1Q15569 626 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 NSUN5Q96P11 429 aaKnown RBP8.71□□□□□ -1.01
VPS13A-203ENST00000360280 VRTNQ9H8Y1 702 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 OSGIN2Q9Y236 505 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 SPI1P17947 270 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 SLC1A3P43003 542 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 CRMP1Q14194 572 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 RGNQ15493 299 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 OR52B6Q8NGF0 335 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 FZD1Q9UP38 647 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 XKRY2A2RUG3 117 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 ADAM23O75077 832 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 SNNO75324 88 aaPredicted RBP8.71□□□□□ -1.01
VPS13A-203ENST00000360280 CHRM4P08173 479 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 HCCSP53701 268 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 SLC9A3R2Q15599 337 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 LAX1Q8IWV1 398 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 OR51L1Q8NGJ5 315 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 ANKUB1A6NFN9 424 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 ZFP92A6NM28 416 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 RGS11O94810 467 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 PSMB1P20618 241 aaKnown RBP8.71□□□□□ -1.01
VPS13A-203ENST00000360280 DPP4P27487 766 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 CSN1S1P47710 185 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 CDRT4Q8N9R6 151 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 MARC2Q969Z3 335 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 LPAR4Q99677 370 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 NEURL4Q96JN8 1562 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 NUP98P52948 1817 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 MTCL1Q9Y4B5 1905 aaKnown RBP8.71□□□□□ -1.01
VPS13A-203ENST00000360280 FOXE1O00358 373 aaPredicted RBP8.71□□□□□ -1.01
VPS13A-203ENST00000360280 BET1O15155 118 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 ITGB8P26012 769 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 TXNDC8Q6A555 127 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 KLHDC8AQ8IYD2 350 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 C1GALT1Q9NS00 363 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 ZDHHC7Q9NXF8 308 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 PCDHAC2Q9Y5I4 1007 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 CRYM-AS1A6NIL9 109 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 PRICKLE3O43900 615 aaPredicted RBP8.71□□□□□ -1.02
VPS13A-203ENST00000360280 USF1P22415 310 aaPredicted RBP8.71□□□□□ -1.02
VPS13A-203ENST00000360280 RABGGTBP53611 331 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 NKAIN3Q8N8D7 197 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 RCE1Q9Y256 329 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 H3BML4 177 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 LEFTY1O75610 366 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 FUT2Q10981 343 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 C18orf63Q68DL7 685 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 GABRPO00591 440 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 TCAPO15273 167 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 IGHG1P01857 330 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 ENKD1Q9H0I2 346 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 NTN4Q9HB63 628 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 KCTD3Q9Y597 815 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 NFS1Q9Y697 457 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 MCRIP1C9JLW8 97 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 LTB4RQ15722 352 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 DEFB115Q30KQ5 88 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 FAM180BQ6P0A1 224 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 IL20RBQ6UXL0 311 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 DUSP22Q9NRW4 184 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 HNRNPA2B1P22626 353 aaKnown RBP8.71□□□□□ -1.02
VPS13A-203ENST00000360280 OPCMLQ14982 345 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 KCNG3Q8TAE7 436 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF300Q96RE9 604 aaPredicted RBP8.71□□□□□ -1.02
VPS13A-203ENST00000360280 MED17Q9NVC6 651 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 KPTNQ9Y664 436 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 LAMB4A4D0S4 1761 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 NUDT21O43809 227 aaKnown RBP8.71□□□□□ -1.02
VPS13A-203ENST00000360280 PMS2P2O95744 297 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 HSF1Q00613 529 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 RPE65Q16518 533 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 CPNE8Q86YQ8 564 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 TFAP2CQ92754 450 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 CLCF1Q9UBD9 225 aa8.71□□□□□ -1.02
VPS13A-203ENST00000360280 NUP214P35658 2090 aaPredicted RBP8.71□□□□□ -1.02
VPS13A-203ENST00000360280 IGLV3-22A0A075B6J6 115 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 XRCC3O43542 346 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 TXNDC12O95881 172 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF728P0DKX0 622 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 CALCRP30988 508 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 RHOXF1Q8NHV9 184 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 C12orf57Q99622 126 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 CHRDL1Q9BU40 450 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 C1orf198Q9H425 327 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 S1PR4O95977 384 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 ACVRL1P37023 503 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 PDZK1IP1Q13113 114 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 PKDCCQ504Y2 493 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 NDFIP1Q9BT67 221 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 POFUT1Q9H488 388 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms