RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 IL20Q9NYY1 176 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 V9GYH0 126 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 PTPRBP23467 1997 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 C9orf172C9J069 976 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 CLEC2LP0C7M8 214 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 PRG2P13727 222 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 HTR2AP28223 471 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 RORAP35398 523 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 EFNA3P52797 238 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 KRR1Q13601 381 aaKnown RBP12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 TBRG1Q3YBR2 411 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 MINDY4Q4G0A6 757 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 TOR2AQ5JU69 321 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 FAM69BQ5VUD6 431 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 RNLSQ5VYX0 342 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 NPSR1Q6W5P4 371 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 LSRQ86X29 649 aaPredicted RBP12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 NRMQ8IXM6 262 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 CMIPQ8IY22 773 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 IQCF1Q8N6M8 205 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 C16orf52Q8NHV5 167 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 OIT3Q8WWZ8 545 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 FGF11Q92914 225 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 PTCHD1Q96NR3 888 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 TAPBPLQ9BX59 468 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 TEX12Q9BXU0 123 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 EGLN3Q9H6Z9 239 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 TMEM27Q9HBJ8 222 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 ACOXLQ9NUZ1 547 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 CNIH4Q9P003 139 aa12.71□□□□□ -0.37
CSNK1E-201ENST00000359867 A0A1W2PQ09 198 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 NPIPB9F8W1W9 429 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 APOL3O95236 402 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 LYPD3O95274 346 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 IGKV1D-16P01601 117 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 GKN3PP0CG01 181 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 CT45A8P0DMV1 189 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 CT45A9P0DMV2 189 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 ETV6P41212 452 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 PGDP52209 483 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 GPR50Q13585 617 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 TIMM50Q3ZCQ8 353 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 CT45A2Q5DJT8 189 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 IGSF11Q5DX21 431 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 PDZK1Q5T2W1 519 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 LIPKQ5VXJ0 399 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 LAPTM4BQ86VI4 370 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 POGLUT1Q8NBL1 392 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 HS6ST2Q96MM7 605 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 SLC38A2Q96QD8 506 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 PLA2G12AQ9BZM1 189 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 FOXJ2Q9P0K8 574 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 CBLCQ9ULV8 474 aa12.71□□□□□ -0.38
CSNK1E-201ENST00000359867 SDK2Q58EX2 2172 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 TLX2O43763 284 aaPredicted RBP12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 PRKYO43930 277 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 STK17BO94768 372 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 ATP12AP54707 1039 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 DCDP81605 110 aaKnown RBP12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 FGFBP1Q14512 234 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 SNAPC1Q16533 368 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 SHEQ5VZ18 495 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 TMPRSS11AQ6ZMR5 421 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 OR4N2Q8NGD1 307 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 TMEM163Q8TC26 289 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 TMEM80Q96HE8 168 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 TAAR9Q96RI9 348 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 DTX4Q9Y2E6 619 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 SPTBN4Q9H254 2564 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 PIEZO1Q92508 2521 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 IGKV3D-11A0A0A0MRZ8 115 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 C17orf105B2RV13 164 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 OR7A10O76100 309 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 SNX4O95219 450 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 CLPSP04118 112 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 IL7P13232 177 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 EIF3IQ13347 325 aaKnown RBP12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 C19orf48Q6RUI8 117 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF550Q7Z398 422 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 RAB43Q86YS6 212 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 OR8D4Q8NGM9 314 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 TMEM239Q8WW34 195 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 CCDC32Q9BV29 185 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 TSSK6Q9BXA6 273 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 TRIM2Q9C040 744 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 RACGAP1Q9H0H5 632 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 SCPEP1Q9HB40 452 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 MED17Q9NVC6 651 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF223Q9UK11 482 aaPredicted RBP12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 TMEM5Q9Y2B1 443 aa12.7□□□□□ -0.38
CSNK1E-201ENST00000359867 SYNDIG1LA6NDD5 238 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 LEUTXA8MZ59 168 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 TNFSF15O95150 251 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 CDRT1O95170 752 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 HBQ1P09105 142 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 RHAGQ02094 409 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 PLAURQ03405 335 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF91Q05481 1191 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 SYT14P1Q58G82 188 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms