RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 DCLRE1BQ9H816 532 aa13.35□□□□□ -0.27
CCNE1-202ENST00000357943 C20orf141Q9NUB4 165 aa13.35□□□□□ -0.27
CCNE1-202ENST00000357943 HDGFL3Q9Y3E1 203 aa13.35□□□□□ -0.27
CCNE1-202ENST00000357943 KDM4EB2RXH2 506 aaPredicted RBP13.34□□□□□ -0.27
CCNE1-202ENST00000357943 GNGT2O14610 69 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 CLOCKO15516 846 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 CXCL13O43927 109 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 PIP5K1CO60331 668 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 DIO1P49895 249 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 SMIM11AP58511 58 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 RBPJQ06330 500 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 LTBQ06643 244 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 LAPTM4AQ15012 233 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 EXOC3L2Q2M3D2 409 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 ZFP1Q6P2D0 407 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 ZNF585AQ6P3V2 769 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 ZNF730Q6ZMV8 503 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 NRMQ8IXM6 262 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 OR4C15Q8NGM1 316 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 OSTF1Q92882 214 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 HS6ST2Q96MM7 605 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 ALPK1Q96QP1 1244 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 SRXN1Q9BYN0 137 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 REEP1Q9H902 201 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 NTN4Q9HB63 628 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 S100A14Q9HCY8 104 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 DNAJB9Q9UBS3 223 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 NKX1-2Q9UD57 310 aaPredicted RBP13.34□□□□□ -0.27
CCNE1-202ENST00000357943 TINAGQ9UJW2 476 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 SAMHD1Q9Y3Z3 626 aaKnown RBP13.34□□□□□ -0.27
CCNE1-202ENST00000357943 NBASA2RRP1 2371 aa13.34□□□□□ -0.27
CCNE1-202ENST00000357943 TRAV36DV7A0A075B6V5 113 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 SH3PXD2BA1X283 911 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 ENO4A6NNW6 628 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 SULT2B1O00204 365 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 PRRG2O14669 202 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 DEAF1O75398 565 aaPredicted RBP13.33□□□□□ -0.28
CCNE1-202ENST00000357943 AHSA1O95433 338 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 KLK2P20151 261 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 FPR1P21462 350 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 CBLP22681 906 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 FASP25445 335 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 IDUAP35475 653 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 CARD18P57730 90 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 RPS3AP61247 264 aaKnown RBP13.33□□□□□ -0.28
CCNE1-202ENST00000357943 OR7A5Q15622 319 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 SGCBQ16585 318 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 FAM69AQ5T7M9 428 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 HMBOX1Q6NT76 420 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 C5orf46Q6UWT4 87 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 C3P1Q6ZMU1 363 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 Q6ZPB1 254 aaPredicted RBP13.33□□□□□ -0.28
CCNE1-202ENST00000357943 MBOAT2Q6ZWT7 520 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 AMIGO2Q86SJ2 522 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 MEX3DQ86XN8 651 aaKnown RBP13.33□□□□□ -0.28
CCNE1-202ENST00000357943 DOLPP1Q86YN1 238 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 SLC25A36Q96CQ1 311 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 MOGAT1Q96PD6 335 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 EPYCQ99645 322 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 SLC19A3Q9BZV2 496 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 MED31Q9Y3C7 131 aa13.33□□□□□ -0.28
CCNE1-202ENST00000357943 LIPT2A6NK58 231 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 FTCDNL1E5RQL4 147 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 PMS2P2O95744 297 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 LDLRP01130 860 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 RAC3P60763 192 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 RCN1Q15293 331 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 ATP6AP1Q15904 470 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 PDSS1Q5T2R2 415 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 TMEM179BQ7Z7N9 219 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 ADGRE4PQ86SQ3 457 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 ZGRF1Q86YA3 2104 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 RNF113BQ8IZP6 322 aaKnown RBP13.32□□□□□ -0.28
CCNE1-202ENST00000357943 OR4K5Q8NGD3 323 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 ZPLD1Q8TCW7 415 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 PKP2Q99959 881 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 KLHL4Q9C0H6 718 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 SEMA6AQ9H2E6 1030 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 SEC14L4Q9UDX3 406 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 SH3BGRL2Q9UJC5 107 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 TRAPPC4Q9Y296 219 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 RP1L1Q8IWN7 2480 aaPredicted RBP13.32□□□□□ -0.28
CCNE1-202ENST00000357943 GTF3C1Q12789 2109 aa13.32□□□□□ -0.28
CCNE1-202ENST00000357943 IGHV3-15A0A0B4J1V0 119 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 CLCA1A8K7I4 914 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 AHRRA9YTQ3 701 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 OR2T1O43869 369 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 WDR1O75083 606 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 CH25HO95992 272 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 BGLAPP02818 100 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 FCGR1AP12314 374 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 IFI30P13284 250 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 ENPP1P22413 925 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 OR2B6P58173 313 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 CSNK2A1P68400 391 aaPredicted RBP13.31□□□□□ -0.28
CCNE1-202ENST00000357943 PON3Q15166 354 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 ZNF74Q16587 644 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 ACSF3Q4G176 576 aaPredicted RBP13.31□□□□□ -0.28
CCNE1-202ENST00000357943 RTL6Q6ICC9 239 aa13.31□□□□□ -0.28
CCNE1-202ENST00000357943 PPP4R4Q6NUP7 873 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms