RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 FBP2O00757 339 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 CTSSP25774 331 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 MICAQ29983 383 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 TREML1Q86YW5 311 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 C12orf49Q9H741 205 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 DNAJB12Q9NXW2 375 aaKnown RBP8.34□□□□□ -1.07
UPF2-202ENST00000357604 TMEM14AQ9Y6G1 99 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 CEACAM4O75871 244 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 CD79AP11912 226 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 KIR2DL3P43628 341 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 TBC1D28Q2M2D7 210 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 EMC4Q5J8M3 183 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 MEDAGQ5VYS4 303 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 Q6ZS92 163 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 GDF7Q7Z4P5 450 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 ZER1Q7Z7L7 766 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 MED18Q9BUE0 208 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 HEXAP06865 529 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 SELEP16581 610 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 POU3F1Q03052 451 aaPredicted RBP8.33□□□□□ -1.08
UPF2-202ENST00000357604 SCRN3Q0VDG4 424 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 CGB2Q6NT52 195 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 DGAT2L6Q6ZPD8 337 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 FTMTQ8N4E7 242 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 IPCEF1Q8WWN9 437 aaPredicted RBP8.33□□□□□ -1.08
UPF2-202ENST00000357604 GNRHR2Q96P88 292 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 ELOVL3Q9HB03 270 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 CDHR4A6H8M9 788 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 MAGEB3O15480 346 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 SLC19A2O60779 497 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 DNAJB6O75190 326 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 YES1P07947 543 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 IRF2P14316 349 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 GRK5P34947 590 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 PHC1P78364 1004 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 PUDPQ08623 228 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 ZXDCQ2QGD7 858 aaPredicted RBP8.33□□□□□ -1.08
UPF2-202ENST00000357604 GXYLT1Q4G148 440 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 THAP5Q7Z6K1 395 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 OR6K3Q8NGY3 331 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 OR10D3Q8NH80 312 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 HAVCR2Q8TDQ0 301 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 PYDC1Q8WXC3 89 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 FAM46AQ96IP4 442 aaKnown RBP8.33□□□□□ -1.08
UPF2-202ENST00000357604 ALG12Q9BV10 488 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 COMMD4Q9H0A8 199 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 PCDHAC1Q9H158 963 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 RHCGQ9UBD6 479 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 PCDHGB5Q9Y5G0 923 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 SCN8AQ9UQD0 1980 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 RALGAPA1Q6GYQ0 2036 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 FADS1O60427 444 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 UBL3O95164 117 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 GRPRP30550 384 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 GDI2P50395 445 aaKnown RBP8.33□□□□□ -1.08
UPF2-202ENST00000357604 IL18R1Q13478 541 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 NRF1Q16656 503 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 C1QTNF12Q5T7M4 302 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 SHQ1Q6PI26 577 aaKnown RBP8.33□□□□□ -1.08
UPF2-202ENST00000357604 FUNDC1Q8IVP5 155 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 SPNS2Q8IVW8 549 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 THRSPQ92748 146 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 TEX37Q96LM6 180 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 ZNF703Q9H7S9 590 aaPredicted RBP8.33□□□□□ -1.08
UPF2-202ENST00000357604 FAM53CQ9NYF3 392 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 ABCD2Q9UBJ2 740 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 PRKCAP17252 672 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 GCGRP47871 477 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 RAC3P60763 192 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 MGAT2Q10469 447 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 DPY19L2P2Q6ZN68 376 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 CPEB3Q8NE35 698 aaKnown RBP8.33□□□□□ -1.08
UPF2-202ENST00000357604 SLC38A1Q9H2H9 487 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 GP6Q9HCN6 339 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 TAS2R1Q9NYW7 299 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 CDH10Q9Y6N8 788 aa8.33□□□□□ -1.08
UPF2-202ENST00000357604 A0A1W2PQ72 361 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 AHCYL1O43865 530 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 CYB5AP00167 134 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 NUDT7P0C024 238 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 EFNA3P52797 238 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 SELPLGQ14242 412 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 SLC27A4Q6P1M0 643 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 XKRXQ6PP77 449 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 FJX1Q86VR8 437 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 ZPLD1Q8TCW7 415 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 TAMM41Q96BW9 452 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 RDH12Q96NR8 316 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 AKIRIN1Q9H9L7 192 aaPredicted RBP8.32□□□□□ -1.08
UPF2-202ENST00000357604 CCM2LQ9NUG4 571 aaPredicted RBP8.32□□□□□ -1.08
UPF2-202ENST00000357604 IKZF2Q9UKS7 526 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 RPL36Q9Y3U8 105 aaKnown RBP8.32□□□□□ -1.08
UPF2-202ENST00000357604 CCDC160A6NGH7 325 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 HRKO00198 91 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 SERPINA3P01011 423 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 MT-ND1P03886 318 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 CHRNB4P30926 498 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 FMO3P31513 532 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 RIPPLY2Q5TAB7 128 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 LEG1Q6P5S2 330 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms