RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 KLHL9Q9P2J3 617 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 CAMK2AQ9UQM7 478 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 NPFFR2Q9Y5X5 522 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 UBE2QL1A1L167 161 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 LINC00862A6NCI5 91 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 C4BPBP20851 252 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 MMP15P51511 669 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 MAP2K6P52564 334 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 ARHGDIBP52566 201 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 ACTC1P68032 377 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 ACTA1P68133 377 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 CST6Q15828 149 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 RPE65Q16518 533 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 TMEM52BQ4KMG9 183 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 MRM1Q6IN84 353 aaKnown RBP12.31□□□□□ -0.44
NCDN-201ENST00000356090 ZDHHC1Q8WTX9 485 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 GIMAP5Q96F15 307 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 RAB11FIP5Q9BXF6 653 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 ACTR6Q9GZN1 396 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 CERS4Q9HA82 394 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 LYARQ9NX58 379 aaKnown RBP12.31□□□□□ -0.44
NCDN-201ENST00000356090 ABRACLQ9P1F3 81 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 SPACA6W5XKT8 324 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 CXorf51AA0A1B0GTR3 108 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 SHOXO15266 292 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 CREBL2O60519 120 aaPredicted RBP12.31□□□□□ -0.44
NCDN-201ENST00000356090 SPDEFO95238 335 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 AGR2O95994 175 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 ATP1B1P05026 303 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 OR8G3PP0DMU2 310 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 AP3S2P59780 193 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 ZP1P60852 638 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 RUNX2Q13950 521 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 CCL4L1Q8NHW4 92 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 RASD2Q96D21 266 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 AHCYL2Q96HN2 611 aaKnown RBP12.31□□□□□ -0.44
NCDN-201ENST00000356090 PGLYRP3Q96LB9 341 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 TIMP4Q99727 224 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 CCDC3Q9BQI4 270 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 SLITRK2Q9H156 845 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 HEXA-AS1Q9H8Q6 139 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 CA10Q9NS85 328 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 SLC27A6Q9Y2P4 619 aa12.31□□□□□ -0.44
NCDN-201ENST00000356090 A0A087WV48 116 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 CSN2P05814 226 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 SULT1A3P0DMM9 295 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 SULT1A4P0DMN0 295 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 ERGP11308 486 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 UBL4AP11441 157 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 NID1P14543 1247 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 SRMP19623 302 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 PGDP52209 483 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 LGALS3BPQ08380 585 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 DEFB115Q30KQ5 88 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 HEPHL1Q6MZM0 1159 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 FAM198BQ6UWH4 519 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 TSACCQ96A04 125 aaPredicted RBP12.3□□□□□ -0.44
NCDN-201ENST00000356090 RERGQ96A58 199 aaPredicted RBP12.3□□□□□ -0.44
NCDN-201ENST00000356090 FOXN4Q96NZ1 517 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 GPN1Q9HCN4 374 aaPredicted RBP12.3□□□□□ -0.44
NCDN-201ENST00000356090 AKAP7Q9P0M2 348 aaPredicted RBP12.3□□□□□ -0.44
NCDN-201ENST00000356090 PFDN2Q9UHV9 154 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 MAFFQ9ULX9 164 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 OR10H1Q9Y4A9 318 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 TEX51A0A1B0GUA7 166 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 ANXA2P2A6NMY6 339 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 H0YC42 278 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 CDK2AP1O14519 115 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 FGF19O95750 216 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 APOC3P02656 99 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 ANXA2P07355 339 aaKnown RBP12.3□□□□□ -0.44
NCDN-201ENST00000356090 ACSM4P0C7M7 580 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 TNFRSF17Q02223 184 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 KCNAB1Q14722 419 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 CDK5R1Q15078 307 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 DEFB110Q30KQ9 67 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 LINC00303Q3SY05 128 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 C4orf46Q504U0 113 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 PRRT3Q5FWE3 981 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 METTL11BQ5VVY1 283 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 PRAMEF8Q5VWM4 474 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 PRAMEF7Q5VXH5 474 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 CFAP77Q6ZQR2 320 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 LSMEM1Q8N8F7 131 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 SMIM4Q8WVI0 70 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 CXorf58Q96LI9 332 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 LINC00052Q96N35 136 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 PITHD1Q9GZP4 211 aaPredicted RBP12.3□□□□□ -0.44
NCDN-201ENST00000356090 COLEC10Q9Y6Z7 277 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 OR2W5A6NFC9 320 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 TVP23AA6NH52 213 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 ATP6V1G2-DDX39BF2Z307 99 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 H7C1C5 153 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 SIGLEC5O15389 551 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 KLF4O43474 513 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 FGF17O60258 216 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 M6PRP20645 277 aa12.3□□□□□ -0.44
NCDN-201ENST00000356090 PEBP1P30086 187 aaKnown RBP12.3□□□□□ -0.44
NCDN-201ENST00000356090 VASPP50552 380 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms