RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 KRBOX1C9JBD0 128 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 C17orf112F2Z3M2 114 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 GPR137BO60478 399 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 SLC43A1O75387 559 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 GOSR1O95249 250 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 NADSYN1Q6IA69 706 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 DESI1Q6ICB0 168 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 SSX7Q7RTT5 188 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 ADIPOR2Q86V24 386 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 OR4M1Q8NGD0 313 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 CPNE7Q9UBL6 633 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 V9GYS6 101 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 ICAM2P13598 275 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 SRP14P37108 136 aaKnown RBP16.14■□□□□ 0.17
COL27A1-201ENST00000356083 TNK1Q13470 666 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 ZFAND4Q86XD8 727 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 FBXL16Q8N461 479 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 FER1L6-AS2Q96M78 137 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 MMP28Q9H239 520 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 ZNF407Q9C0G0 2248 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 CDK2AP1O14519 115 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 GSRP00390 522 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 OR5I1Q13606 314 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 GCNT2Q8N0V5 402 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 FAM58AQ8N1B3 248 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 DNAJC22Q8N4W6 341 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 OR2T35Q8NGX2 323 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 PITHD1Q9GZP4 211 aaPredicted RBP16.13■□□□□ 0.17
COL27A1-201ENST00000356083 ARL2-SNX15V9GYD0 113 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 ADAM23O75077 832 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 CSN1S1P47710 185 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 RPL26P61254 145 aaKnown RBP16.13■□□□□ 0.17
COL27A1-201ENST00000356083 ADPRMQ3LIE5 342 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 MAF1Q9H063 256 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 ACTL7AQ9Y615 435 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 CD38P28907 300 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 GPR18Q14330 331 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 DEFB108BQ8NET1 73 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 MED18Q9BUE0 208 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 PTTG3PQ9NZH4 202 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 PAFAH1B3Q15102 231 aaKnown RBP16.13■□□□□ 0.17
COL27A1-201ENST00000356083 PHYHD1Q5SRE7 291 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 TMPRSS11FQ6ZWK6 438 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 PIGWQ7Z7B1 504 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 DUSP19Q8WTR2 217 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 RIMS4Q9H426 269 aaPredicted RBP16.13■□□□□ 0.17
COL27A1-201ENST00000356083 TMEM269A0A1B0GVZ9 245 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 GLB1P16278 677 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 CD6P30203 668 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 CSNK1EP49674 416 aaKnown RBP16.13■□□□□ 0.17
COL27A1-201ENST00000356083 CLINT1Q14677 625 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 SLC35D2Q76EJ3 337 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 OR5M1Q8NGP8 315 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 TCTN2Q96GX1 697 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 TSSK2Q96PF2 358 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 FAM124BQ9H5Z6 455 aaPredicted RBP16.13■□□□□ 0.17
COL27A1-201ENST00000356083 XPNPEP1Q9NQW7 623 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 CDK4P11802 303 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 GM2AP17900 193 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 PSAPL1Q6NUJ1 521 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 CHRNA9Q9UGM1 479 aa16.13■□□□□ 0.17
COL27A1-201ENST00000356083 DDAH2O95865 285 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 CEBPBP17676 345 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 PTTG1IPP53801 180 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 GALNT2Q10471 571 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 PHLDA2Q53GA4 152 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 EMG1Q92979 244 aaKnown RBP16.12■□□□□ 0.17
COL27A1-201ENST00000356083 AKR1E2Q96JD6 320 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 OR11A1Q9GZK7 315 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 CACNA1BQ00975 2339 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 CRMP1Q14194 572 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 METTL11BQ5VVY1 283 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 CNIH2Q6PI25 160 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 FAM111BQ6SJ93 734 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 ZNF546Q86UE3 836 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 TFAP2CQ92754 450 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 ZBTB8AQ96BR9 441 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 FCRL3Q96P31 734 aaPredicted RBP16.12■□□□□ 0.17
COL27A1-201ENST00000356083 ARFGEF3Q5TH69 2177 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 BMPR1AP36894 532 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 SSR4P51571 173 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 ILKQ13418 452 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 CCBE1Q6UXH8 406 aaPredicted RBP16.12■□□□□ 0.17
COL27A1-201ENST00000356083 SLC35G3Q8N808 338 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 OR10G3Q8NGC4 313 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 OR2B2Q9GZK3 357 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 CPNE5Q9HCH3 593 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 RALGAPA1Q6GYQ0 2036 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 NCBP2LA6PVI3 153 aaKnown RBP16.12■□□□□ 0.17
COL27A1-201ENST00000356083 ZNF587BE7ETH6 402 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 LGI1O95970 557 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 TUSC1Q2TAM9 212 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.12■□□□□ 0.171e-6■■□□□ 12
COL27A1-201ENST00000356083 GLTPQ9NZD2 209 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 NAV1Q8NEY1 1877 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 OR4D1Q15615 310 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 SLC36A2Q495M3 483 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 MISPQ8IVT2 679 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 ZFAND1Q8TCF1 268 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms