RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 C3P1Q6ZMU1 363 aa13.94□□□□□ -0.18
TRIM13-201ENST00000356017 NKAIN4Q8IVV8 208 aa13.94□□□□□ -0.18
TRIM13-201ENST00000356017 OR6S1Q8NH40 331 aa13.94□□□□□ -0.18
TRIM13-201ENST00000356017 MFSD8Q8NHS3 518 aa13.94□□□□□ -0.18
TRIM13-201ENST00000356017 TMEM239Q8WW34 195 aa13.94□□□□□ -0.18
TRIM13-201ENST00000356017 WNT2BQ93097 391 aa13.94□□□□□ -0.18
TRIM13-201ENST00000356017 ZNF845Q96IR2 970 aaPredicted RBP13.94□□□□□ -0.18
TRIM13-201ENST00000356017 CHID1Q9BWS9 393 aa13.94□□□□□ -0.18
TRIM13-201ENST00000356017 PRRG4Q9BZD6 226 aa13.94□□□□□ -0.18
TRIM13-201ENST00000356017 CCM2LQ9NUG4 571 aaPredicted RBP13.94□□□□□ -0.18
TRIM13-201ENST00000356017 MEMO1Q9Y316 297 aa13.94□□□□□ -0.18
TRIM13-201ENST00000356017 FAM215AQ9Y5M1 114 aa13.94□□□□□ -0.18
TRIM13-201ENST00000356017 IGKV1D-42A0A075B6H8 117 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 KRT36O76013 467 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 IGF2P01344 180 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 TIMP3P35625 211 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 ACTR3P61158 418 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 ZNF239Q16600 458 aaKnown RBP13.93□□□□□ -0.18
TRIM13-201ENST00000356017 GTF2IRD2BQ6EKJ0 949 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 RTL6Q6ICC9 239 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 RPTNQ6XPR3 784 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 WDR88Q6ZMY6 472 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 RRM2BQ7LG56 351 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 GTF2IRD2Q86UP8 949 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 RNF113BQ8IZP6 322 aaKnown RBP13.93□□□□□ -0.18
TRIM13-201ENST00000356017 KTI12Q96EK9 354 aaPredicted RBP13.93□□□□□ -0.18
TRIM13-201ENST00000356017 TM9SF2Q99805 663 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 TTYH2Q9BSA4 534 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 CLCF1Q9UBD9 225 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 MED31Q9Y3C7 131 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 MBD3L4A6NDZ8 208 aaPredicted RBP13.93□□□□□ -0.18
TRIM13-201ENST00000356017 MBD3L3A6NE82 208 aaPredicted RBP13.93□□□□□ -0.18
TRIM13-201ENST00000356017 MBD3L5A6NJ08 208 aaPredicted RBP13.93□□□□□ -0.18
TRIM13-201ENST00000356017 LIPT2A6NK58 231 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 LRRTM2O43300 516 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 DIRAS1O95057 198 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 GADD45GO95257 159 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 IMPDH2P12268 514 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 ENPP1P22413 925 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 RPS5P46782 204 aaKnown RBP13.93□□□□□ -0.18
TRIM13-201ENST00000356017 OR2B6P58173 313 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 SPIBQ01892 262 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 OR2A2Q6IF42 318 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 P4HA3Q7Z4N8 544 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 SLC43A2Q8N370 569 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 PAPD5Q8NDF8 572 aaKnown RBP13.93□□□□□ -0.18
TRIM13-201ENST00000356017 MBD3L2Q8NHZ7 208 aaPredicted RBP13.93□□□□□ -0.18
TRIM13-201ENST00000356017 FNDC9Q8TBE3 224 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 TMEM255BQ8WV15 326 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 ACOT11Q8WXI4 607 aaPredicted RBP13.93□□□□□ -0.18
TRIM13-201ENST00000356017 DHRS1Q96LJ7 313 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 NAA11Q9BSU3 229 aaPredicted RBP13.93□□□□□ -0.18
TRIM13-201ENST00000356017 MAN2C1Q9NTJ4 1040 aa13.93□□□□□ -0.18
TRIM13-201ENST00000356017 ZGRF1Q86YA3 2104 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 MT-ATP6P00846 226 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 IL2RAP01589 272 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 MT-ND1P03886 318 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 FPR1P21462 350 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 GTF2E2P29084 291 aaKnown RBP13.92□□□□□ -0.18
TRIM13-201ENST00000356017 RRM2P31350 389 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 ERFP50548 548 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 AGFG1P52594 562 aaKnown RBP13.92□□□□□ -0.18
TRIM13-201ENST00000356017 FOXD4Q12950 439 aaPredicted RBP13.92□□□□□ -0.18
TRIM13-201ENST00000356017 CCNIQ14094 377 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 GK3PQ14409 553 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 OR7A5Q15622 319 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 FGD3Q5JSP0 725 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 PPP4R4Q6NUP7 873 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 ZNF730Q6ZMV8 503 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 FJX1Q86VR8 437 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 P3H2Q8IVL5 708 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 TAAR8Q969N4 342 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 DUS3LQ96G46 650 aaKnown RBP13.92□□□□□ -0.18
TRIM13-201ENST00000356017 ZFP3Q96NJ6 502 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 DMRTA2Q96SC8 542 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 PTDSS2Q9BVG9 487 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 SRXN1Q9BYN0 137 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 SLC5A6Q9Y289 635 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 TESMINQ9Y4I5 508 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 ZNF462Q96JM2 2506 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 MED12Q93074 2177 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 GTF3C1Q12789 2109 aa13.92□□□□□ -0.18
TRIM13-201ENST00000356017 POLEQ07864 2286 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 FKBP6O75344 327 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 CST1P01037 141 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 GLI4P10075 376 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 PER3P56645 1201 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 NUP107P57740 925 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 H3F3AP84243 136 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 PMPCAQ10713 525 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 KPNB1Q14974 876 aaKnown RBP13.91□□□□□ -0.18
TRIM13-201ENST00000356017 RNPS1Q15287 305 aaKnown RBP13.91□□□□□ -0.18
TRIM13-201ENST00000356017 OR2T5Q6IEZ7 315 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 PAQR6Q6TCH4 344 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 FCRLAQ7L513 359 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 CDK20Q8IZL9 346 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 C10orf53Q8N6V4 93 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 OR2T29Q8NH02 315 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 OR52J3Q8NH60 311 aa13.91□□□□□ -0.18
TRIM13-201ENST00000356017 SLC7A13Q8TCU3 470 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms