RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 GRASPQ7Z6J2 395 aaPredicted RBP12.56□□□□□ -0.4
TRIM4-203ENST00000355947 IL17RCQ8NAC3 791 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 OR4D10Q8NGI6 311 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 CASTOR1Q8WTX7 329 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 OR8D1Q8WZ84 308 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 RASD2Q96D21 266 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 ACTR6Q9GZN1 396 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 STARD5Q9NSY2 213 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 SUSD5O60279 629 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 IFNGP01579 166 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 SEC61A1P61619 476 aaKnown RBP12.55□□□□□ -0.4
TRIM4-203ENST00000355947 PLA2G7Q13093 441 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 GK2Q14410 553 aaPredicted RBP12.55□□□□□ -0.4
TRIM4-203ENST00000355947 PON3Q15166 354 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 B3GNTL1Q67FW5 361 aaPredicted RBP12.55□□□□□ -0.4
TRIM4-203ENST00000355947 SLAIN1Q8ND83 568 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 SMIM4Q8WVI0 70 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 C3orf49Q96BT1 292 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 ZNF649Q9BS31 505 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 EXOGQ9Y2C4 368 aaKnown RBP12.55□□□□□ -0.4
TRIM4-203ENST00000355947 OR2W5A6NFC9 320 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 MCRIP1C9JLW8 97 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 PRNPP04156 253 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 INHAP05111 366 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 IL9P15248 144 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 HIST1H1CP16403 213 aaKnown RBP12.55□□□□□ -0.4
TRIM4-203ENST00000355947 PTBP1P26599 531 aaKnown RBP eCLIP12.55□□□□□ -0.42e-9■■■■□ 21.1
TRIM4-203ENST00000355947 HTR2AP28223 471 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 PGDP52209 483 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 AP3S2P59780 193 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 KLF9Q13886 244 aaPredicted RBP12.55□□□□□ -0.4
TRIM4-203ENST00000355947 ZNF273Q14593 569 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 GJD3Q8N144 294 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 LMLNQ96KR4 655 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 AICDAQ9GZX7 198 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 TMEM231Q9H6L2 316 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 MRPS18AQ9NVS2 196 aaKnown RBP12.55□□□□□ -0.4
TRIM4-203ENST00000355947 HPF1Q9NWY4 346 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 CALML5Q9NZT1 146 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 DISC1C4P0D8 188 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 PRRT4C9JH25 899 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 CACNB4O00305 520 aaPredicted RBP12.55□□□□□ -0.4
TRIM4-203ENST00000355947 SRMP19623 302 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 MMP15P51511 669 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 NRG3P56975 720 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 GMFBP60983 142 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 CBFBQ13951 182 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 CLVS2Q5SYC1 327 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 ZNF676Q8N7Q3 588 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 OR51S1Q8NGJ8 323 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 OR5K2Q8NHB8 316 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 MS4A6EQ96DS6 147 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 TSNAXQ99598 290 aaKnown RBP12.55□□□□□ -0.4
TRIM4-203ENST00000355947 IL21RQ9HBE5 538 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 ADGRL4Q9HBW9 690 aa12.55□□□□□ -0.4
TRIM4-203ENST00000355947 GXYLT2A0PJZ3 443 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 M0QYG6 137 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 F12P00748 615 aaPredicted RBP12.54□□□□□ -0.4
TRIM4-203ENST00000355947 ZP3P21754 424 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 DDX6P26196 483 aaKnown RBP eCLIP12.54□□□□□ -0.42e-6■■■■□ 26
TRIM4-203ENST00000355947 FXYD6P3P58550 94 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 SLC7A9P82251 487 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 REEP5Q00765 189 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 PRDX1Q06830 199 aaKnown RBP12.54□□□□□ -0.4
TRIM4-203ENST00000355947 PRRT3Q5FWE3 981 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 SLC25A30Q5SVS4 291 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 MRM1Q6IN84 353 aaKnown RBP12.54□□□□□ -0.4
TRIM4-203ENST00000355947 ZCCHC12Q6PEW1 402 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 MAMSTRQ6ZN01 415 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 TPRA1Q86W33 373 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 PARGQ86W56 976 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 SLC35F2Q8IXU6 374 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 SUSD6Q92537 303 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 TRIM43Q96BQ3 446 aaPredicted RBP12.54□□□□□ -0.4
TRIM4-203ENST00000355947 CHST6Q9GZX3 395 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 HMX1Q9NP08 348 aaPredicted RBP12.54□□□□□ -0.4
TRIM4-203ENST00000355947 APOBEC3BQ9UH17 382 aaKnown RBP12.54□□□□□ -0.4
TRIM4-203ENST00000355947 SLC35A3Q9Y2D2 325 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 TMEM72A0PK05 275 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 ZNF879B4DU55 563 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 F5H5P2 479 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 RBBP9O75884 186 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 IRF5Q13568 498 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 ALG10BQ5I7T1 473 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 STPG1Q5TH74 334 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 ABHD17CQ6PCB6 329 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 PAQR7Q86WK9 346 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 TSEN15Q8WW01 171 aaKnown RBP12.54□□□□□ -0.4
TRIM4-203ENST00000355947 SLITRK2Q9H156 845 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 BCL2L10Q9HD36 194 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 ASF1BQ9NVP2 202 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 ZNF230Q9UIE0 474 aaPredicted RBP12.54□□□□□ -0.4
TRIM4-203ENST00000355947 FBXO4Q9UKT5 387 aa12.54□□□□□ -0.4
TRIM4-203ENST00000355947 RANBP2P49792 3224 aaKnown RBP12.54□□□□□ -0.4
TRIM4-203ENST00000355947 A0A0A6YYD5 115 aa12.53□□□□□ -0.4
TRIM4-203ENST00000355947 ATG12O94817 140 aa12.53□□□□□ -0.4
TRIM4-203ENST00000355947 SERPINA3P01011 423 aa12.53□□□□□ -0.4
TRIM4-203ENST00000355947 LUMP51884 338 aaPredicted RBP12.53□□□□□ -0.4
TRIM4-203ENST00000355947 GAS6Q14393 721 aa12.53□□□□□ -0.4
TRIM4-203ENST00000355947 UNQ6126/PRO20091Q6UXV3 157 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms