RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 C1GALT1C1Q96EU7 318 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 CDK15Q96Q40 435 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 THTPAQ9BU02 230 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 CCDC106Q9BWC9 280 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 HDHD5Q9BXW7 423 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 IPPKQ9H8X2 491 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 NMRAL1Q9HBL8 299 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 EML4Q9HC35 981 aaKnown RBP9.94□□□□□ -0.82
RTN3-204ENST00000354497 SLCO1B3Q9NPD5 702 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 AKIP1Q9NQ31 210 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 RIMS3Q9UJD0 308 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 CES1P1Q9UKY3 287 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 ELOA3DA6NLF2 546 aaPredicted RBP9.93□□□□□ -0.82
RTN3-204ENST00000354497 CCRL2O00421 344 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 TNFSF11O14788 317 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 TCF21O43680 179 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 BCAS2O75934 225 aaPredicted RBP9.93□□□□□ -0.82
RTN3-204ENST00000354497 SLITRK5O94991 958 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 ADAP00813 363 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 CCNA2P20248 432 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 IL11P20809 199 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 USF1P22415 310 aaPredicted RBP9.93□□□□□ -0.82
RTN3-204ENST00000354497 HPCAL1P37235 193 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 GTF2H2Q13888 395 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 MORF4L2Q15014 288 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 PFKFB4Q16877 469 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 ELOA3BQ3SY89 546 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 TMEM201Q5SNT2 666 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 SFRP5Q5T4F7 317 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 ATG16L1Q676U5 607 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 GTF2H2CQ6P1K8 395 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 GOLGA7Q7Z5G4 137 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 ISCA2Q86U28 154 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 CCDC116Q8IYX3 515 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 ELOA3Q8NG57 546 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 OR9A2Q8NGT5 310 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 PIWIL2Q8TC59 973 aaKnown RBP9.93□□□□□ -0.82
RTN3-204ENST00000354497 DUSP19Q8WTR2 217 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 CMTM5Q96DZ9 223 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 DUS3LQ96G46 650 aaKnown RBP9.93□□□□□ -0.82
RTN3-204ENST00000354497 C1orf159Q96HA4 380 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 SH3YL1Q96HL8 342 aaPredicted RBP9.93□□□□□ -0.82
RTN3-204ENST00000354497 MAP6Q96JE9 813 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 ATOH8Q96SQ7 321 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 GPR22Q99680 433 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 RBBP8Q99708 897 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 FAIM2Q9BWQ8 316 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 TMEM120AQ9BXJ8 343 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 POTEKPQ9BYX7 375 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 ADAM19Q9H013 955 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 TMEM185BQ9H7F4 350 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 NPHS2Q9NP85 383 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 GLRX2Q9NS18 164 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 MRPL39Q9NYK5 338 aaKnown RBP9.93□□□□□ -0.82
RTN3-204ENST00000354497 UTS2RQ9UKP6 389 aa9.93□□□□□ -0.82
RTN3-204ENST00000354497 PRSS51A0A1B0GVH4 220 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 WDR91A4D1P6 747 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 CXorf49A8MYA2 514 aaPredicted RBP9.92□□□□□ -0.82
RTN3-204ENST00000354497 SHISA9B4DS77 424 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 ABCD4O14678 606 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 SLC22A2O15244 555 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 GCM2O75603 506 aaPredicted RBP9.92□□□□□ -0.82
RTN3-204ENST00000354497 CLDN9O95484 217 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 BCL10O95999 233 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 KRT8P05787 483 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 ITGA2P17301 1181 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 CD40LGP29965 261 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 ILF2Q12905 390 aaKnown RBP9.92□□□□□ -0.82
RTN3-204ENST00000354497 LRRC36Q1X8D7 754 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 ZNF628Q5EBL2 1059 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 METTL11BQ5VVY1 283 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 LETMD1Q6P1Q0 360 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 ZNF767PQ75MW2 155 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 BHLHA15Q7RTS1 189 aaPredicted RBP9.92□□□□□ -0.82
RTN3-204ENST00000354497 COMMD6Q7Z4G1 85 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 CMC1Q7Z7K0 106 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 MEX3DQ86XN8 651 aaKnown RBP9.92□□□□□ -0.82
RTN3-204ENST00000354497 ADGRG5Q8IZF4 528 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.92□□□□□ -0.82
RTN3-204ENST00000354497 OR2V1Q8NHB1 315 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 C10orf105Q8TEF2 133 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 RNF138Q8WVD3 245 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 NXNL1Q96CM4 212 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 CNRIP1Q96F85 164 aaPredicted RBP9.92□□□□□ -0.82
RTN3-204ENST00000354497 UBXN10Q96LJ8 280 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 VSTM2LQ96N03 204 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 MCMBPQ9BTE3 642 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 RTN4RQ9BZR6 473 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 NANOGQ9H9S0 305 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 PAQR5Q9NXK6 330 aaPredicted RBP9.92□□□□□ -0.82
RTN3-204ENST00000354497 NINJ2Q9NZG7 142 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 ADAM29Q9UKF5 820 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 POMPQ9Y244 141 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 CORINQ9Y5Q5 1042 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 AUP1Q9Y679 476 aa9.92□□□□□ -0.82
RTN3-204ENST00000354497 LCE2BO14633 110 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 FADS1O60427 444 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 UGDHO60701 494 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 PTTG1O95997 202 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 IFNA14P01570 189 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms