RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 RNF13O43567 381 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 RCBTB2O95199 551 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 ACP5P13686 325 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 SDHAP31040 664 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 CTSOP43234 321 aaPredicted RBP13.38□□□□□ -0.27
SPPL3-201ENST00000353487 RPP30P78346 268 aaKnown RBP13.38□□□□□ -0.27
SPPL3-201ENST00000353487 MLIPQ5VWP3 458 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 BAIAP2L2Q6UXY1 529 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 RHOUQ7L0Q8 258 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 VRK2Q86Y07 508 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 C9orf62Q8N4C0 152 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 ARL14Q8N4G2 192 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 OR10G6Q8NH81 332 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 FOXRED1Q96CU9 486 aaPredicted RBP13.38□□□□□ -0.27
SPPL3-201ENST00000353487 SLC41A3Q96GZ6 507 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 SLC19A3Q9BZV2 496 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 NXF2Q9GZY0 626 aaKnown RBP13.38□□□□□ -0.27
SPPL3-201ENST00000353487 GHITMQ9H3K2 345 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 SRA1Q9HD15 236 aaKnown RBP13.38□□□□□ -0.27
SPPL3-201ENST00000353487 FAM96BQ9Y3D0 163 aa13.38□□□□□ -0.27
SPPL3-201ENST00000353487 IGLV3-25P01717 112 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 HMGN2P05204 90 aaKnown RBP13.37□□□□□ -0.27
SPPL3-201ENST00000353487 PTAFRP25105 342 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TLX1P31314 330 aaPredicted RBP13.37□□□□□ -0.27
SPPL3-201ENST00000353487 CD70P32970 193 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 SPINT3P49223 89 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 LIM2P55344 173 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 MINDY4Q4G0A6 757 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 C22orf39Q6P5X5 142 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 A0A1W2PRU2 124 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 CPED1A4D0V7 1026 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 MBLAC1A4D2B0 266 aaPredicted RBP13.37□□□□□ -0.27
SPPL3-201ENST00000353487 NPC1O15118 1278 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 NDUFS4O43181 175 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 ZNF44P15621 663 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 AK4P27144 223 aaPredicted RBP13.37□□□□□ -0.27
SPPL3-201ENST00000353487 SNRPGP62308 76 aaKnown RBP13.37□□□□□ -0.27
SPPL3-201ENST00000353487 GXYLT1Q4G148 440 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 SOHLH1Q5JUK2 328 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 OR6V1Q8N148 313 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 BBS1Q8NFJ9 593 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 OR5M3Q8NGP4 307 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 ZFPM2Q8WW38 1151 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 WDR89Q96FK6 387 aaPredicted RBP13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TBC1D3DA0A087WVF3 549 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TBC1D3IA0A087WXS9 549 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TBC1D3EA0A087X179 549 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TBC1D3KA0A087X1G2 549 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TBC1D3BA6NDS4 549 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TBC1D3FA6NER0 549 aaPredicted RBP13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TBC1D3LB9A6J9 549 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 M0QZQ0 153 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 IFNA2P01563 188 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 SBK2P0C263 348 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TBC1D3HP0C7X1 549 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 DAOP14920 347 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 CPEP16870 476 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 ZNF8P17098 575 aaPredicted RBP13.37□□□□□ -0.27
SPPL3-201ENST00000353487 SLC6A11P48066 632 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 CCR8P51685 355 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TAS2R43P59537 309 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 ETFDHQ16134 617 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 FAM69AQ5T7M9 428 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TBC1D3GQ6DHY5 549 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TBC1D3CQ6IPX1 549 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 GID4Q8IVV7 300 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TBC1D3Q8IZP1 549 aaPredicted RBP13.37□□□□□ -0.27
SPPL3-201ENST00000353487 L3MBTL4Q8NA19 623 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 SPACA1Q9HBV2 294 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 CABIN1Q9Y6J0 2220 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 DCDC2BA2VCK2 349 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 TMEM202A6NGA9 273 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 HEPACAM2A8MVW5 462 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 CASC3O15234 703 aaKnown RBP13.37□□□□□ -0.27
SPPL3-201ENST00000353487 YY2O15391 372 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 MPC1LP0DKB6 136 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 PTHLHP12272 177 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 FABP4P15090 132 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 MSR1P21757 451 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 WASP42768 502 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 RPL29P47914 159 aaKnown RBP13.37□□□□□ -0.27
SPPL3-201ENST00000353487 SLC11A1P49279 550 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 CLCNKAP51800 687 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 PFN3P60673 137 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 ENPP2Q13822 863 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 GPR139Q6DWJ6 353 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 OR52W1Q6IF63 320 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 OR52E2Q8NGJ4 325 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 GHSRQ92847 366 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 PHB2Q99623 299 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 AUNIPQ9H7T9 357 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 DMRT3Q9NQL9 472 aa13.37□□□□□ -0.27
SPPL3-201ENST00000353487 A8MVJ9 347 aa13.36□□□□□ -0.27
SPPL3-201ENST00000353487 ACOT7O00154 380 aa13.36□□□□□ -0.27
SPPL3-201ENST00000353487 DCTN6O00399 190 aa13.36□□□□□ -0.27
SPPL3-201ENST00000353487 PRKRAO75569 313 aaKnown RBP13.36□□□□□ -0.27
SPPL3-201ENST00000353487 CFDP00746 253 aaPredicted RBP13.36□□□□□ -0.27
SPPL3-201ENST00000353487 MRPL19P49406 292 aaKnown RBP13.36□□□□□ -0.27
SPPL3-201ENST00000353487 HNF4GQ14541 408 aa13.36□□□□□ -0.27
SPPL3-201ENST00000353487 FAM24BQ8N5W8 94 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms