RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PAICSP22234 425 aaKnown RBP7.9□□□□□ -1.14
TRIM55-204ENST00000353317 AHCYP23526 432 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 TALDO1P37837 337 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 RFX3P48380 749 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 FXYD6P3P58550 94 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 BDH1Q02338 343 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 ESCO2Q56NI9 601 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 ACBD7Q8N6N7 88 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 TMEM99Q8N816 258 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 OR11H4Q8NGC9 324 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 NR4A3Q92570 626 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 GIMAP5Q96F15 307 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 SCMH1Q96GD3 660 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 ZDHHC12Q96GR4 267 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 MAP6Q96JE9 813 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 MED28Q9H204 178 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 GHITMQ9H3K2 345 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 ATP13A2Q9NQ11 1180 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 LYARQ9NX58 379 aaKnown RBP7.9□□□□□ -1.14
TRIM55-204ENST00000353317 SLCO1C1Q9NYB5 712 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 SEMA5BQ9P283 1151 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 DHCR7Q9UBM7 475 aaKnown RBP7.9□□□□□ -1.14
TRIM55-204ENST00000353317 SUSD2Q9UGT4 822 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 SLC7A7Q9UM01 511 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 ENTPD4Q9Y227 616 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 CACNG2Q9Y698 323 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 C7orf66A4D0T2 115 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 HRKO00198 91 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 EMC8O43402 210 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 SRPX2O60687 465 aaPredicted RBP7.9□□□□□ -1.15
TRIM55-204ENST00000353317 RFPL3O75679 317 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 CSNK2A2P19784 350 aaPredicted RBP7.9□□□□□ -1.15
TRIM55-204ENST00000353317 CXCL3P19876 107 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 RBMS1P29558 406 aaKnown RBP7.9□□□□□ -1.15
TRIM55-204ENST00000353317 PRKAR1BP31321 381 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 IFNA8P32881 189 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 GPR3P46089 330 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 PER3P56645 1201 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 MGAT2Q10469 447 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 NTRK2Q16620 822 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 SLC36A2Q495M3 483 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 MANEAQ5SRI9 462 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 NIPAL3Q6P499 406 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 SFXN4Q6P4A7 337 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 TEX261Q6UWH6 196 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 C16orf62Q7Z3J2 963 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 SLC16A11Q8NCK7 471 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 PEX11GQ96HA9 241 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 SLC41A2Q96JW4 573 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 GPR137Q96N19 417 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 PDE7BQ9NP56 450 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 B3GNT2Q9NY97 397 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 MAT2BQ9NZL9 334 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 MGAT4AQ9UM21 535 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 PLCL2Q9UPR0 1127 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 U3KQ87 197 aa7.9□□□□□ -1.15
TRIM55-204ENST00000353317 A0A0G2JK05 382 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 URADA6NGE7 173 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 TMEM150CB9EJG8 249 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 TPD52L2O43399 206 aaKnown RBP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 TIAF1O95411 115 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 HMGN1P05114 100 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 SYPP08247 313 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 NPR2P20594 1047 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 SDHBP21912 280 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 MPIP34949 423 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 OR1D4P47884 311 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 ARL9Q6T311 187 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF782Q6ZMW2 699 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 FRRS1Q6ZNA5 592 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 D2HGDHQ8N465 521 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 LRRC17Q8N6Y2 441 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 SLC38A9Q8NBW4 561 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 OR5W2Q8NH69 310 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF431Q8TF32 576 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 KISS1RQ969F8 398 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 MOAP1Q96BY2 351 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 SLC35A4Q96G79 324 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 OR52D1Q9H346 318 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 LYRM4Q9HD34 91 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 DIABLOQ9NR28 239 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 KLHL28Q9NXS3 571 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF222Q9UK12 451 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 ELF5Q9UKW6 265 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 CUL9Q8IWT3 2517 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 CENPVL1A0A0U1RR11 272 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 FITM1A5D6W6 292 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 DUX1O43812 170 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 FZD7O75084 574 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 REM1O75628 298 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 DHFRP00374 187 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 CPMP14384 443 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 F8A1P23610 371 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 HSD11B2P80365 405 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 E2F1Q01094 437 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 DUSP8Q13202 625 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 SLC25A35Q3KQZ1 300 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF528Q3MIS6 628 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms