RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 SLC25A35Q3KQZ1 300 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 SLC35D3Q5M8T2 416 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 Q6ZS52 159 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 ASCC1Q8N9N2 400 aaKnown RBP20.28■□□□□ 0.84
UPF3A-201ENST00000351487 NPEPL1Q8NDH3 523 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 OR13C5Q8NGS8 318 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 THAP7Q9BT49 309 aaPredicted RBP20.28■□□□□ 0.84
UPF3A-201ENST00000351487 HDHD2Q9H0R4 259 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 UCK1Q9HA47 277 aa20.28■□□□□ 0.84
UPF3A-201ENST00000351487 LRRN3E7EW58 273 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 OR7A10O76100 309 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 CLPSP04118 112 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 TFPIP10646 304 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 PGDP52209 483 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 HCCSP53701 268 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 PON3Q15166 354 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 KLHL26Q53HC5 615 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 HACD4Q5VWC8 232 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 PYHIN1Q6K0P9 492 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 LIX1LQ8IVB5 337 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 NMNAT2Q9BZQ4 307 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 LRRN3Q9H3W5 708 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 ZCCHC4Q9H5U6 513 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 PAHP00439 452 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 IGF2P01344 180 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 RPL4P36578 427 aaKnown RBP20.27■□□□□ 0.84
UPF3A-201ENST00000351487 SIRPAP78324 504 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 GPR176Q14439 515 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 RPL22L1Q6P5R6 122 aaKnown RBP20.27■□□□□ 0.84
UPF3A-201ENST00000351487 OIT3Q8WWZ8 545 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 THAP4Q8WY91 577 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 PELOQ9BRX2 385 aaKnown RBP20.27■□□□□ 0.84
UPF3A-201ENST00000351487 BEX2Q9BXY8 128 aa20.27■□□□□ 0.84
UPF3A-201ENST00000351487 PAQR5Q9NXK6 330 aaPredicted RBP20.27■□□□□ 0.84
UPF3A-201ENST00000351487 LILRA5A6NI73 299 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 NOTOA8MTQ0 251 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 LANCL1O43813 399 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 ARL6IP5O75915 188 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 PROS1P07225 676 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 ARSBP15848 533 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 NAA10P41227 235 aaPredicted RBP20.26■□□□□ 0.83
UPF3A-201ENST00000351487 AGFG1P52594 562 aaKnown RBP20.26■□□□□ 0.83
UPF3A-201ENST00000351487 IL10RAQ13651 578 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 ZSCAN1Q8NBB4 408 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 OR51L1Q8NGJ5 315 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 MSANTD3Q96H12 275 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 TTTY10Q9BZA0 68 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 PRODH2Q9UF12 536 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 PLCL2Q9UPR0 1127 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 MPDZO75970 2070 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 OR2W5A6NFC9 320 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 FZD7O75084 574 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 GATBO75879 557 aaKnown RBP20.26■□□□□ 0.83
UPF3A-201ENST00000351487 UCHL1P09936 223 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 PRPS1P60891 318 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 RPS11P62280 158 aaKnown RBP eCLIP20.26■□□□□ 0.83
UPF3A-201ENST00000351487 CCDC58Q4VC31 144 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 FNDC7Q5VTL7 733 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 SLITRK4Q8IW52 837 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 MMABQ96EY8 250 aaPredicted RBP20.26■□□□□ 0.83
UPF3A-201ENST00000351487 NMNAT3Q96T66 252 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 ABRACLQ9P1F3 81 aa20.26■□□□□ 0.83
UPF3A-201ENST00000351487 EML5Q05BV3 1969 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 IGKV1D-42A0A075B6H8 117 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 HYAL3O43820 417 aaPredicted RBP20.25■□□□□ 0.83
UPF3A-201ENST00000351487 SPI1P17947 270 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 ADH7P40394 386 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 BTG1P62324 171 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 SERTAD2Q14140 314 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 PLA1AQ53H76 456 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 GPR135Q8IZ08 494 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 SNX33Q8WV41 574 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 ZNRF4Q8WWF5 429 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 MRPL48Q96GC5 212 aaKnown RBP20.25■□□□□ 0.83
UPF3A-201ENST00000351487 ABHD1Q96SE0 405 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 TRAF4Q9BUZ4 470 aaPredicted RBP20.25■□□□□ 0.83
UPF3A-201ENST00000351487 ANKRD61A6NGH8 418 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 INMT-MINDY4F8WBC2 141 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 AGRPO00253 132 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 MAGEB4O15481 346 aaPredicted RBP20.25■□□□□ 0.83
UPF3A-201ENST00000351487 AHCYP23526 432 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 RRAS2P62070 204 aaPredicted RBP20.25■□□□□ 0.83
UPF3A-201ENST00000351487 HSF2Q03933 536 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 YIPF7Q8N8F6 280 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 OR51Q1Q8NH59 317 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 RPS4Y2Q8TD47 263 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 NCDNQ9UBB6 729 aa20.25■□□□□ 0.83
UPF3A-201ENST00000351487 TMEM184BQ9Y519 407 aaPredicted RBP20.25■□□□□ 0.83
UPF3A-201ENST00000351487 OR6C68A6NDL8 312 aa20.24■□□□□ 0.83
UPF3A-201ENST00000351487 CHURC1-FNTBB4DL54 471 aa20.24■□□□□ 0.83
UPF3A-201ENST00000351487 H0YIG0 161 aa20.24■□□□□ 0.83
UPF3A-201ENST00000351487 IFNA16P05015 189 aa20.24■□□□□ 0.83
UPF3A-201ENST00000351487 EPXP11678 715 aa20.24■□□□□ 0.83
UPF3A-201ENST00000351487 ATF1P18846 271 aa20.24■□□□□ 0.83
UPF3A-201ENST00000351487 FNTBP49356 437 aa20.24■□□□□ 0.83
UPF3A-201ENST00000351487 ELOCQ15369 112 aa20.24■□□□□ 0.83
UPF3A-201ENST00000351487 CEP78Q5JTW2 689 aa20.24■□□□□ 0.83
UPF3A-201ENST00000351487 OR7G1Q8NGA0 311 aa20.24■□□□□ 0.83
UPF3A-201ENST00000351487 LIPHQ8WWY8 451 aa20.24■□□□□ 0.83
UPF3A-201ENST00000351487 TMEM246Q9BRR3 403 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms