RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 GAREM1Q9H706 876 aa9.57□□□□□ -0.88
SMPD4-201ENST00000351288 SF3B6Q9Y3B4 125 aaKnown RBP9.57□□□□□ -0.88
SMPD4-201ENST00000351288 CDH10Q9Y6N8 788 aa9.57□□□□□ -0.88
SMPD4-201ENST00000351288 PATE3B3GLJ2 98 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 LANCL1O43813 399 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 FOLR1P15328 257 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 CCKBRP32239 447 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 RORAP35398 523 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 OR12D2P58182 307 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 OC90Q02509 493 aaPredicted RBP9.56□□□□□ -0.88
SMPD4-201ENST00000351288 LGALS3BPQ08380 585 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 DMWDQ09019 674 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 RAB40BQ12829 278 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 GPR50Q13585 617 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 PRAMEF20Q5VT98 475 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 SLC35F3Q8IY50 421 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 LINC00471Q8N535 108 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 ZNF248Q8NDW4 579 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 C17orf47Q8NEP4 570 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 CCDC74AQ96AQ1 378 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 TMCO6Q96DC7 493 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 NECAB3Q96P71 396 aaPredicted RBP9.56□□□□□ -0.88
SMPD4-201ENST00000351288 ARHGAP9Q9BRR9 750 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 G6PC3Q9BUM1 346 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 SEC61A2Q9H9S3 476 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 PRODH2Q9UF12 536 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 GPN3Q9UHW5 284 aaPredicted RBP9.56□□□□□ -0.88
SMPD4-201ENST00000351288 ING1Q9UK53 422 aaPredicted RBP9.56□□□□□ -0.88
SMPD4-201ENST00000351288 MRTO4Q9UKD2 239 aaKnown RBP9.56□□□□□ -0.88
SMPD4-201ENST00000351288 A0A087WV48 116 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 IQCMA0A1B0GVH7 501 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 TLCD2A6NGC4 264 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 POLR1CO15160 346 aaPredicted RBP9.56□□□□□ -0.88
SMPD4-201ENST00000351288 CTNSO60931 367 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 ZNF136P52737 540 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 FAM53BQ14153 422 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 FAM199XQ6PEV8 388 aaPredicted RBP9.56□□□□□ -0.88
SMPD4-201ENST00000351288 CBLN3Q6UW01 205 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 RASSF6Q6ZTQ3 369 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 NKD1Q969G9 470 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 CRB3Q9BUF7 120 aa9.56□□□□□ -0.88
SMPD4-201ENST00000351288 MRPL15Q9P015 296 aaKnown RBP9.56□□□□□ -0.88
SMPD4-201ENST00000351288 MYEF2Q9P2K5 600 aaKnown RBP9.56□□□□□ -0.88
SMPD4-201ENST00000351288 TRAV6A0A075B6T7 132 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 OR6C70A6NIJ9 312 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 B4DXG7 233 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 SYPP08247 313 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 SFTPDP35247 375 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 MAGEA8P43361 318 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 PSMD4P55036 377 aaKnown RBP9.55□□□□□ -0.88
SMPD4-201ENST00000351288 C3orf38Q5JPI3 329 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 AADACL4Q5VUY2 407 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 CARD17Q5XLA6 110 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 SSX6Q7RTT6 188 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 ZNF550Q7Z398 422 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 FAM220AQ7Z4H9 259 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 YIPF7Q8N8F6 280 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 SCAIQ8N9R8 606 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 OR5M1Q8NGP8 315 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 DAZLQ92904 295 aaKnown RBP9.55□□□□□ -0.88
SMPD4-201ENST00000351288 ST6GAL2Q96JF0 529 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 C4orf36Q96KX1 117 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 Q96M85 177 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 CDX2Q99626 313 aaPredicted RBP9.55□□□□□ -0.88
SMPD4-201ENST00000351288 TMEM246Q9BRR3 403 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 NDEL1Q9GZM8 345 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 METTL7AQ9H8H3 244 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 GRHPRQ9UBQ7 328 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 FAM240BA0A1B0GVZ2 78 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 CENPXA8MT69 81 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 TBX19O60806 448 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 PRKAR1BP31321 381 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 STAT5AP42229 794 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 HSD11B2P80365 405 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 EFNB1P98172 346 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 KIRREL2Q6UWL6 708 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 MBOAT2Q6ZWT7 520 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 SAMD12Q8N8I0 201 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 SLC37A3Q8NCC5 494 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 FGF11Q92914 225 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 NKX3-1Q99801 234 aaPredicted RBP9.55□□□□□ -0.88
SMPD4-201ENST00000351288 ARHGDIGQ99819 225 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 MCUBQ9NWR8 336 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 A3GALT2U3KPV4 340 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 PCDH15Q96QU1 1955 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 IDSB3KWA1 339 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 ELK1P19419 428 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 ETV6P41212 452 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 NRG3P56975 720 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 TEKQ02763 1124 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 MLC1Q15049 377 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 GLYR1Q49A26 553 aaPredicted RBP9.55□□□□□ -0.88
SMPD4-201ENST00000351288 VASNQ6EMK4 673 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 ZNF544Q6NX49 715 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 PLET1Q6UQ28 207 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 TMEM91Q6ZNR0 172 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 QSOX2Q6ZRP7 698 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 PTP4A1Q93096 173 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 PRSS27Q9BQR3 290 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 ORAI3Q9BRQ5 295 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms