RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ZNF208O43345 1280 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 SSTR4P31391 388 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 NAA10P41227 235 aaPredicted RBP11.24□□□□□ -0.61
SMAD9-201ENST00000350148 GLO1Q04760 184 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 HNRNPA0Q13151 305 aaKnown RBP11.24□□□□□ -0.61
SMAD9-201ENST00000350148 GALEQ14376 348 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 ZNF750Q32MQ0 723 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 C8orf82Q6P1X6 216 aaPredicted RBP11.24□□□□□ -0.61
SMAD9-201ENST00000350148 WDR53Q7Z5U6 358 aaPredicted RBP11.24□□□□□ -0.61
SMAD9-201ENST00000350148 GPR137CQ8N3F9 429 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 SLC25A43Q8WUT9 341 aaPredicted RBP11.24□□□□□ -0.61
SMAD9-201ENST00000350148 ZNF566Q969W8 418 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 CNRIP1Q96F85 164 aaPredicted RBP11.24□□□□□ -0.61
SMAD9-201ENST00000350148 GAL3ST1Q99999 423 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 TP63Q9H3D4 680 aaPredicted RBP11.24□□□□□ -0.61
SMAD9-201ENST00000350148 IKZF5Q9H5V7 419 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 DHDHQ9UQ10 334 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 NUMA1Q14980 2115 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 FRG2CA6NGY1 282 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 H3BUI4 141 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 GALNSP34059 522 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 SLC6A9P48067 706 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 EMX1Q04741 257 aaPredicted RBP11.24□□□□□ -0.61
SMAD9-201ENST00000350148 ZNF91Q05481 1191 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 TRMT12Q53H54 448 aaKnown RBP11.24□□□□□ -0.61
SMAD9-201ENST00000350148 FAHD1Q6P587 224 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 UNQ6126/PRO20091Q6UXV3 157 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 ZNF704Q6ZNC4 412 aaPredicted RBP11.24□□□□□ -0.61
SMAD9-201ENST00000350148 SPRED2Q7Z698 418 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 CHST4Q8NCG5 386 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 MSLNLQ96KJ4 702 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 C14orf119Q9NWQ9 140 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 CLEC4AQ9UMR7 237 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 DIMT1Q9UNQ2 313 aaKnown RBP11.24□□□□□ -0.61
SMAD9-201ENST00000350148 RNF215Q9Y6U7 377 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 SPCS2Q15005 226 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 RNF151Q2KHN1 245 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 LINGO2Q7L985 606 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 OR2L13Q8N349 312 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 IFT46Q9NQC8 304 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 TTLL8A6PVC2 850 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 KCNK2O95069 426 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 PRH1P02810 166 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 MAOAP21397 527 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 PTGER1P34995 402 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 SFTPA1Q8IWL2 248 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 ZNF283Q8N7M2 679 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 OR5T3Q8NGG3 340 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 HDHD5Q9BXW7 423 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 TUBG2Q9NRH3 451 aa11.24□□□□□ -0.61
SMAD9-201ENST00000350148 A6NCN8 305 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 FAM227AF5H4B4 570 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 GPRIN2O60269 458 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 GATBO75879 557 aaKnown RBP11.23□□□□□ -0.61
SMAD9-201ENST00000350148 EPHA8P29322 1005 aaPredicted RBP11.23□□□□□ -0.61
SMAD9-201ENST00000350148 PNLIPRP2P54317 469 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 UBE2IP63279 158 aaKnown RBP11.23□□□□□ -0.61
SMAD9-201ENST00000350148 SIGLEC14Q08ET2 396 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 RRNAD1Q96FB5 475 aaKnown RBP11.23□□□□□ -0.61
SMAD9-201ENST00000350148 INTS14Q96SY0 518 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 SLC25A19Q9HC21 320 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 NDRG4Q9ULP0 352 aaKnown RBP11.23□□□□□ -0.61
SMAD9-201ENST00000350148 KLK4Q9Y5K2 254 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 MAN2A2P49641 1150 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 DUSP7Q16829 419 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 C6orf15Q6UXA7 325 aaPredicted RBP11.23□□□□□ -0.61
SMAD9-201ENST00000350148 SFXN2Q96NB2 322 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 GPR52Q9Y2T5 361 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 ZNF35P13682 527 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 HTR1FP30939 366 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 RNF144AP50876 292 aaPredicted RBP11.23□□□□□ -0.61
SMAD9-201ENST00000350148 GRINAQ7Z429 371 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 SNX11Q9Y5W9 270 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 EPOPA6NHQ4 379 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 A8MVM7 634 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 SULT2B1O00204 365 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 IL9P15248 144 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 P2RX1P51575 399 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 MAP2K6P52564 334 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 SUMO3P55854 103 aaPredicted RBP11.23□□□□□ -0.61
SMAD9-201ENST00000350148 STARD6P59095 220 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 HLA-BQ31612 363 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 FCRL6Q6DN72 434 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 ABHD12BQ7Z5M8 362 aaPredicted RBP11.23□□□□□ -0.61
SMAD9-201ENST00000350148 BBS1Q8NFJ9 593 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 CCDC107Q8WV48 283 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 PHB2Q99623 299 aa11.23□□□□□ -0.61
SMAD9-201ENST00000350148 PRAMEF25A6NGN4 478 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 TACR3P29371 465 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 SLC35A1P78382 337 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 IL11RAQ14626 422 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 LINC00299Q6ZSB3 139 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 MSRB3Q8IXL7 192 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 ZNF454Q8N9F8 522 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 MEPEQ9NQ76 525 aaPredicted RBP11.22□□□□□ -0.61
SMAD9-201ENST00000350148 LRRN3E7EW58 273 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 SUSD5O60279 629 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 DNAJB6O75190 326 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 CHRM4P08173 479 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms