RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TOMM34Q15785 309 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 ALG10BQ5I7T1 473 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 BCL2L15Q5TBC7 163 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 FAM205BPQ63HN1 556 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 OR51A4Q8NGJ6 313 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 LILRB4Q8NHJ6 448 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 GPBAR1Q8TDU6 330 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 MAP3K3Q99759 626 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 NRSN2Q9GZP1 204 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 SLC28A3Q9HAS3 691 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 DUSP22Q9NRW4 184 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 PIAS3Q9Y6X2 628 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 A0A1B0GVT2 93 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 ACOD1A6NK06 481 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 PRR23D1E9PI22 279 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 GMDSO60547 372 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 FZD7O75084 574 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 SERPINI2O75830 405 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 HPXP02790 462 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 PRR23D2P0DMB1 279 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 RPS5P46782 204 aaKnown RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 POU6F2P78424 691 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 RIN1Q13671 783 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 LINC01590Q5TEZ4 76 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 LCN1P1Q5VSP4 162 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 ASCC1Q8N9N2 400 aaKnown RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 CDRT4Q8N9R6 151 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 SRFBP1Q8NEF9 429 aaKnown RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 DNAAF1Q8NEP3 725 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 C16orf52Q8NHV5 167 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 GRPEL2Q8TAA5 225 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 TRMT10AQ8TBZ6 339 aaKnown RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 HAVCR2Q8TDQ0 301 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 PIGKQ92643 395 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 ATOH1Q92858 354 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 RFKQ969G6 155 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 YIPF5Q969M3 257 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 ZC3HAV1LQ96H79 300 aaKnown RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 SNX18Q96RF0 628 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 AMELYQ99218 206 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 OR2B2Q9GZK3 357 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 MED17Q9NVC6 651 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 KLHL28Q9NXS3 571 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 CD207Q9UJ71 328 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 CYP8B1Q9UNU6 501 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 GSTK1Q9Y2Q3 226 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 UNC13CQ8NB66 2214 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 A0A087WV62 115 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 CENPXA8MT69 81 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 DOK2O60496 412 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 MT-ND4P03905 459 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 AHCYP23526 432 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 IFNGR2P38484 337 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 GPR3P46089 330 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 DMWDQ09019 674 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 FAPQ12884 760 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 ADAM15Q13444 863 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 CCDC58Q4VC31 144 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 PRR22Q8IZ63 422 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 SLC44A3Q8N4M1 653 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 ARL6IP6Q8N6S5 226 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 SPRTNQ9H040 489 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 LYRM4Q9HD34 91 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 ZFP64Q9NPA5 681 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 LUZP4Q9P127 313 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 ERVK-19Q9WJR5 959 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 PCDHGB7Q9Y5F8 929 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 IGHV5-51A0A0C4DH38 117 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 CCDC163A0A0D9SF12 145 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 B4DGG1 531 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 APBB3O95704 486 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 F13BP05160 661 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 FCER2P06734 321 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ADRA2CP18825 462 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 BMP8BP34820 402 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 GABRA4P48169 554 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ZP1P60852 638 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF267Q14586 743 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 CSRP2Q16527 193 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF57Q68EA5 555 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 HBMQ6B0K9 141 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ASPHD2Q6ICH7 369 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 METAP1DQ6UB28 335 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 C16orf47Q6ZP98 133 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ABHD13Q7L211 337 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 BMP8AQ7Z5Y6 402 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 RANBP3LQ86VV4 465 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 PARGQ86W56 976 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 SIAH3Q8IW03 269 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 TIGD4Q8IY51 512 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 BCORP1Q8N888 145 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF615Q8N8J6 731 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ENKURQ8TC29 256 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 Q96M85 177 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 UBL7Q96S82 380 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 GSDMCQ9BYG8 508 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 DUSP15Q9H1R2 295 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 GHITMQ9H3K2 345 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 CALML5Q9NZT1 146 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms